The 2.0 version of rSNPBase

Variant report

Variant rs41270861
Chromosome Location chr1:161337604-161337605
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161294200-161338200 Weak transcription Small Intestine intestine
2 chr1:161304600-161342600 Weak transcription Esophagus oesophagus
3 chr1:161305000-161337800 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:161312600-161341200 Weak transcription HMEC breast
5 chr1:161313000-161338400 Weak transcription Pancreas Pancrea
6 chr1:161313000-161341000 Weak transcription H9 Cell Line embryonic stem cell
7 chr1:161313000-161341200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:161317200-161338200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:161321600-161337800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr1:161321800-161348800 Weak transcription Gastric stomach
11 chr1:161327200-161339200 Weak transcription NHLF lung
12 chr1:161327400-161337800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:161327400-161337800 Weak transcription Brain Germinal Matrix brain
14 chr1:161327400-161352600 Weak transcription Lung lung
15 chr1:161327600-161338600 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:161328400-161359000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:161328600-161359000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:161329800-161337800 Weak transcription Brain Cingulate Gyrus brain
19 chr1:161333400-161337800 Weak transcription HUVEC blood vessel
20 chr1:161333800-161337800 Weak transcription Brain Angular Gyrus brain
21 chr1:161333800-161337800 Weak transcription Ovary ovary
22 chr1:161334000-161342000 Weak transcription Aorta Aorta
23 chr1:161334400-161338000 Weak transcription Fetal Lung lung
24 chr1:161335000-161356000 Weak transcription K562 blood
25 chr1:161335200-161338000 Weak transcription HSMMtube muscle
26 chr1:161336000-161338200 Weak transcription Fetal Brain Female brain
27 chr1:161336200-161337800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:161336200-161337800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:161336400-161338000 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr1:161336400-161338400 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr1:161336400-161339600 Weak transcription Adipose Nuclei Adipose
32 chr1:161336400-161339800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:161336400-161341600 Weak transcription Primary T cells from cord blood blood
34 chr1:161336400-161342600 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr1:161336400-161348800 Weak transcription Placenta Placenta
36 chr1:161336600-161337800 Weak transcription H1 Cell Line embryonic stem cell
37 chr1:161336600-161337800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:161336600-161338400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr1:161336600-161340200 Weak transcription Hela-S3 cervix
40 chr1:161336600-161351600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr1:161336600-161352200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:161336600-161352200 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr1:161336800-161337800 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr1:161336800-161338400 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr1:161336800-161338600 Enhancers Liver Liver
46 chr1:161336800-161338600 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr1:161336800-161338600 Weak transcription Thymus Thymus
48 chr1:161336800-161338800 Weak transcription Fetal Stomach stomach
49 chr1:161336800-161339000 Weak transcription HSMM muscle
50 chr1:161336800-161339200 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015