Variant report

Variant	rs16832809
Chromosome Location	chr1:161285292-161285293
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:161014785..161017336-chr1:161283873..161286388,3	K562	blood:
2	chr1:161282416..161286426-chr1:161334773..161339073,4	K562	blood:
3	chr1:161177155..161181241-chr1:161281992..161286131,5	K562	blood:
4	chr1:161282812..161285638-chr1:161335844..161339793,4	MCF-7	breast:
5	chr1:161167845..161171671-chr1:161283687..161286298,5	K562	blood:
6	chr1:161199531..161202492-chr1:161284908..161286481,2	K562	blood:
7	chr1:161284338..161286990-chr1:161287610..161289670,3	MCF-7	breast:
8	chr1:161194292..161205045-chr1:161279588..161288493,17	K562	blood:
9	chr1:161284181..161285749-chr1:161296030..161299261,3	K562	blood:
10	chr1:161284112..161286514-chr1:161369211..161371355,2	K562	blood:
11	chr1:161281081..161283792-chr1:161284991..161286522,2	MCF-7	breast:
12	chr1:161194451..161198420-chr1:161282525..161287303,8	K562	blood:

No data

Variant related genes	Relation type
ENSG00000143257	Chromatin interaction
ENSG00000158864	Chromatin interaction
ENSG00000263548	Chromatin interaction
ENSG00000158859	Chromatin interaction
ENSG00000158882	Chromatin interaction
ENSG00000188931	Chromatin interaction
ENSG00000206921	Chromatin interaction
ENSG00000143252	Chromatin interaction
ENSG00000235477	Chromatin interaction
ENSG00000158773	Chromatin interaction

Extended variants
information (count: 195 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:193)

rs_ID	r²[population]
rs10157158	0.92[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs10157457	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10157990	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10157991	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10158388	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10159083	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10494350	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10494351	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10494352	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10494353	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10494354	1.00[CEU][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10494355	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1133805	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1133806	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11582439	0.92[CHB][hapmap];0.89[JPT][hapmap];0.86[ASN][1000 genomes]
rs11588994	0.89[ASN][1000 genomes]
rs12239492	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12239719	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12385723	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12385733	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12725465	0.92[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12730813	0.92[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs12737323	0.90[ASN][1000 genomes]
rs12738660	0.92[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12745476	0.91[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs12757174	0.87[ASN][1000 genomes]
rs13374037	1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13375385	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13376158	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832811	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16832813	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16832817	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16832820	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16832823	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16832824	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16832826	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16832835	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832842	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832846	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832851	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832854	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832866	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs16832869	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832871	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832872	0.91[CHB][hapmap];0.82[JPT][hapmap]
rs16832874	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832883	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs16832884	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832887	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832892	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16832894	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832897	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832900	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832902	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832908	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16832922	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs16832948	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs16832949	1.00[CEU][hapmap];0.90[CHB][hapmap];0.84[JPT][hapmap];0.89[EUR][1000 genomes]
rs3087596	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34872203	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35006684	0.89[ASN][1000 genomes]
rs35130144	0.84[ASN][1000 genomes]
rs35215727	0.87[ASN][1000 genomes]
rs35680024	0.92[ASN][1000 genomes]
rs3934593	0.92[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs3935401	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4077289	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4077290	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4077629	0.91[CHB][hapmap];0.83[JPT][hapmap]
rs4077631	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs41270861	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4255402	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4255403	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4291521	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4319356	0.85[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4360541	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4400628	0.95[ASN][1000 genomes]
rs4463689	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4469725	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4474277	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4477296	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4481873	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4525064	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4534403	0.88[ASN][1000 genomes]
rs4534404	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4534405	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4585997	1.00[CEU][hapmap];0.91[CHB][hapmap];0.84[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4600063	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4622080	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4631719	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4634926	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4634927	0.92[CHB][hapmap];0.93[JPT][hapmap];0.88[ASN][1000 genomes]
rs55674249	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs55682614	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55690323	0.97[ASN][1000 genomes]
rs55694670	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55698724	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs55729989	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55747162	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs55775286	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55783815	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55807618	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55809622	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55839314	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55898518	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55929617	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55961103	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55962831	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55981028	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55996762	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56007456	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56028608	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56062031	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56071922	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56122953	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56169917	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56269923	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56280055	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56290916	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56291729	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56355322	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56358807	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56406825	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56411570	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56868836	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57007882	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57154376	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57270150	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57306652	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57421557	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57473118	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57474688	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs57835711	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57841279	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57858140	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58055613	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs58138146	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58418155	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58758353	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58840032	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs58842513	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58874147	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59037769	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs59191996	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59340690	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59544428	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59559479	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59690240	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59747425	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59774375	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59840298	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs60078979	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60179510	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs60261157	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60309040	0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs60345130	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60382588	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs60405593	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs60435895	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs60792683	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60799370	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs60882053	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61181161	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61219424	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61299084	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61304797	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs61308286	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61410886	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61447446	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61461118	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61576374	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61608953	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61618989	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61653684	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6675552	0.89[ASN][1000 genomes]
rs6688180	0.89[ASN][1000 genomes]
rs7412460	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs74124931	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74124933	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74127622	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs74127629	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74127630	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74127635	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74127636	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74127638	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs74127639	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs74127640	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74127641	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs74127657	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs74127658	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7542784	0.88[ASN][1000 genomes]
rs9330294	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9970904	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432986	chr1:161221133-161673682	Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv1010776	chr1:161282384-161409218	Weak transcription Bivalent/Poised TSS Flanking Active TSS Enhancers Active TSS Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs16832809	RP11-122G18.5	cis	Muscle Skeletal	GTEx
rs16832809	RP11-122G18.5	cis	Artery Tibial	GTEx
rs16832809	SDHC	Cis_1M	lymphoblastoid	RTeQTL
rs16832809	SDHC	cis	Whole Blood	GTEx

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:161283400-161285400	Active TSS	Pancreatic Islets	Pancreatic Islet
2	chr1:161283600-161285400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr1:161283600-161285400	Active TSS	Psoas Muscle	Psoas
4	chr1:161283800-161285400	Active TSS	HUES6 Cell Line	embryonic stem cell
5	chr1:161283800-161285400	Active TSS	Fetal Intestine Small	intestine
6	chr1:161284000-161285600	Active TSS	HSMM	muscle
7	chr1:161284600-161285400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr1:161284600-161285400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
9	chr1:161284600-161285400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr1:161284600-161285400	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
11	chr1:161284600-161285400	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr1:161284600-161285400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr1:161284600-161285400	Flanking Active TSS	Liver	Liver
14	chr1:161284600-161285400	Flanking Active TSS	Brain Cingulate Gyrus	brain
15	chr1:161284600-161285400	Flanking Active TSS	Brain Hippocampus Middle	brain
16	chr1:161284600-161285400	Flanking Active TSS	Duodenum Mucosa	Duodenum
17	chr1:161284600-161285400	Flanking Active TSS	Rectal Smooth Muscle	rectum
18	chr1:161284600-161285400	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
19	chr1:161284600-161285400	Flanking Active TSS	Dnd41	blood
20	chr1:161284800-161285400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr1:161284800-161285400	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
22	chr1:161284800-161285400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr1:161284800-161285400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
24	chr1:161284800-161285400	Flanking Active TSS	Fetal Heart	heart
25	chr1:161284800-161285400	Weak transcription	Lung	lung
26	chr1:161284800-161285400	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
27	chr1:161284800-161285400	Flanking Active TSS	NH-A	brain
28	chr1:161284800-161285400	Flanking Active TSS	Osteobl	bone
29	chr1:161284800-161285600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr1:161284800-161286400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
31	chr1:161284800-161288600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr1:161284800-161289200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr1:161284800-161293600	Weak transcription	Small Intestine	intestine
34	chr1:161284800-161295000	Weak transcription	Spleen	Spleen
35	chr1:161284800-161300400	Weak transcription	Aorta	Aorta
36	chr1:161285000-161285400	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr1:161285000-161285400	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
38	chr1:161285000-161285400	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
39	chr1:161285000-161285400	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
40	chr1:161285000-161285400	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
41	chr1:161285000-161285400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr1:161285000-161285400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr1:161285000-161285400	Enhancers	Primary neutrophils fromperipheralblood	blood
44	chr1:161285000-161285400	Enhancers	Primary B cells from peripheral blood	blood
45	chr1:161285000-161285400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
46	chr1:161285000-161285400	Enhancers	Primary T helper cells fromperipheralblood	blood
47	chr1:161285000-161285400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
48	chr1:161285000-161285400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
49	chr1:161285000-161285400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
50	chr1:161285000-161285400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood

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