The 2.0 version of rSNPBase

Variant report

Variant rs7542784
Chromosome Location chr1:161345367-161345368
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161321800-161348800 Weak transcription Gastric stomach
2 chr1:161327400-161352600 Weak transcription Lung lung
3 chr1:161328400-161359000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:161328600-161359000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:161335000-161356000 Weak transcription K562 blood
6 chr1:161336400-161348800 Weak transcription Placenta Placenta
7 chr1:161336600-161351600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr1:161336600-161352200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:161336600-161352200 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr1:161336800-161348600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr1:161336800-161348800 Weak transcription Fetal Muscle Leg muscle
12 chr1:161336800-161348800 Weak transcription Fetal Thymus thymus
13 chr1:161336800-161351600 Weak transcription NHEK skin
14 chr1:161337800-161348800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:161337800-161356200 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr1:161338000-161346000 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr1:161338000-161351600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:161338000-161356000 Weak transcription GM12878-XiMat blood
19 chr1:161338200-161348600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:161338600-161346800 Weak transcription HepG2 liver
21 chr1:161344400-161348800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr1:161344600-161348800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015