The 2.0 version of rSNPBase

Variant report

Variant rs56062031
Chromosome Location chr1:161363890-161363891
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161360600-161368800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:161360600-161368800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:161360600-161368800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:161360600-161368800 Weak transcription Ovary ovary
5 chr1:161360800-161368200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:161360800-161368400 Weak transcription Stomach Smooth Muscle stomach
7 chr1:161360800-161368600 Weak transcription Brain Inferior Temporal Lobe brain
8 chr1:161360800-161368600 Weak transcription Fetal Muscle Trunk muscle
9 chr1:161361000-161367200 Weak transcription A549 lung
10 chr1:161361000-161368400 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:161361000-161368600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:161361000-161368600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr1:161361000-161368600 Weak transcription Brain Angular Gyrus brain
14 chr1:161361000-161368600 Weak transcription Fetal Stomach stomach
15 chr1:161361000-161368600 Weak transcription NHDF-Ad bronchial
16 chr1:161361200-161367800 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr1:161361200-161368600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:161361200-161368600 Weak transcription Fetal Lung lung
19 chr1:161361400-161368800 Weak transcription Fetal Brain Male brain
20 chr1:161362400-161364400 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr1:161363200-161367600 Weak transcription HepG2 liver
22 chr1:161363400-161366600 Weak transcription K562 blood
23 chr1:161363400-161368000 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015