The 2.0 version of rSNPBase

Variant report

Variant rs4255402
Chromosome Location chr1:161293193-161293194
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161284800-161293600 Weak transcription Small Intestine intestine
2 chr1:161284800-161295000 Weak transcription Spleen Spleen
3 chr1:161284800-161300400 Weak transcription Aorta Aorta
4 chr1:161285000-161293400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:161285000-161295600 Weak transcription Gastric stomach
6 chr1:161285000-161296600 Weak transcription Colonic Mucosa Colon
7 chr1:161285000-161298400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:161285000-161301800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:161285200-161293400 Weak transcription Fetal Brain Female brain
10 chr1:161285200-161293800 Weak transcription H9 Cell Line embryonic stem cell
11 chr1:161285200-161293800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:161285200-161293800 Weak transcription Adipose Nuclei Adipose
13 chr1:161285200-161293800 Weak transcription Fetal Muscle Leg muscle
14 chr1:161285200-161293800 Weak transcription Fetal Thymus thymus
15 chr1:161285200-161295400 Weak transcription Primary B cells from cord blood blood
16 chr1:161285200-161295400 Weak transcription Brain Substantia Nigra brain
17 chr1:161285200-161295400 Weak transcription Fetal Kidney kidney
18 chr1:161285200-161295400 Weak transcription Right Ventricle heart
19 chr1:161285200-161299200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:161285200-161321400 Weak transcription Stomach Mucosa stomach
21 chr1:161285400-161293200 Weak transcription Primary B cells from peripheral blood blood
22 chr1:161285400-161293200 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr1:161285400-161293200 Weak transcription Muscle Satellite Cultured Cells --
24 chr1:161285400-161293400 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr1:161285400-161293800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:161285400-161293800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:161285400-161293800 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr1:161285400-161293800 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr1:161285400-161293800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:161285400-161293800 Weak transcription Brain Angular Gyrus brain
31 chr1:161285400-161293800 Weak transcription Colon Smooth Muscle Colon
32 chr1:161285400-161293800 Weak transcription Fetal Lung lung
33 chr1:161285400-161293800 Weak transcription Placenta Amnion Placenta Amnion
34 chr1:161285400-161293800 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr1:161285400-161293800 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:161285400-161294600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:161285400-161294600 Weak transcription Brain Cingulate Gyrus brain
38 chr1:161285400-161295200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:161285400-161295400 Weak transcription Primary T cells from cord blood blood
40 chr1:161285400-161295400 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr1:161285400-161295400 Weak transcription Brain Hippocampus Middle brain
42 chr1:161285400-161295400 Weak transcription A549 lung
43 chr1:161285400-161295800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr1:161285400-161296800 Weak transcription HSMMtube muscle
45 chr1:161285400-161298200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr1:161285400-161298400 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr1:161285400-161299800 Weak transcription Psoas Muscle Psoas
48 chr1:161285400-161302000 Weak transcription Fetal Brain Male brain
49 chr1:161285400-161303400 Weak transcription Rectal Smooth Muscle rectum
50 chr1:161285400-161303600 Weak transcription NHLF lung

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Last update: Aug 31, 2015