Variant report

Variant	rs4523784
Chromosome Location	chr12:26329788-26329789
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:26308693..26311647-chr12:26329505..26331946,2	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1009766	0.81[CEU][hapmap];0.83[JPT][hapmap]
rs1480034	0.86[JPT][hapmap]
rs1480035	0.86[JPT][hapmap]
rs1552041	0.86[CHB][hapmap];0.92[JPT][hapmap];0.87[ASN][1000 genomes]
rs16930287	0.87[ASN][1000 genomes]
rs16930293	0.83[CEU][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs1871554	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1871555	0.87[ASN][1000 genomes]
rs4517620	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55775247	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56713764	0.90[ASN][1000 genomes]
rs59428444	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6487541	0.85[JPT][hapmap]
rs73082972	0.88[EUR][1000 genomes]
rs73084743	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73084753	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73084765	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs73084774	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73084782	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73084785	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73086945	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73086947	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73086950	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73086956	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73086959	0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7969850	0.82[CEU][hapmap];0.83[JPT][hapmap];0.80[ASN][1000 genomes]
rs875296	0.86[JPT][hapmap]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26326600-26330200	Weak transcription	GM12878-XiMat	blood
2	chr12:26328200-26331200	Enhancers	Rectal Mucosa Donor 31	rectum
3	chr12:26329200-26331000	Enhancers	Fetal Intestine Small	intestine
4	chr12:26329200-26331200	Enhancers	Fetal Intestine Large	intestine
5	chr12:26329400-26330600	Enhancers	Stomach Mucosa	stomach
6	chr12:26329400-26331200	Enhancers	Small Intestine	intestine
7	chr12:26329600-26329800	Flanking Active TSS	Duodenum Mucosa	Duodenum
8	chr12:26329600-26330200	Active TSS	Rectal Mucosa Donor 29	rectum

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