Variant report

Variant	rs45572141
Chromosome Location	chr10:97252824-97252825
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10509690	0.87[AMR][1000 genomes]
rs4918940	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55941659	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61868706	0.82[AMR][1000 genomes]
rs725926	0.87[AMR][1000 genomes]

Chromatin state (count:56 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97237200-97254000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:97239600-97260800	Weak transcription	Brain Germinal Matrix	brain
3	chr10:97240600-97253000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr10:97240800-97253400	Weak transcription	Duodenum Mucosa	Duodenum
5	chr10:97241000-97260600	Weak transcription	Fetal Muscle Trunk	muscle
6	chr10:97241400-97253600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr10:97241600-97254000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr10:97241600-97260400	Weak transcription	Fetal Brain Male	brain
9	chr10:97241600-97260600	Weak transcription	Fetal Stomach	stomach
10	chr10:97241800-97256400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr10:97242000-97253800	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr10:97242000-97256400	Weak transcription	Cortex derived primary cultured neurospheres	brain
13	chr10:97242800-97256000	Weak transcription	Fetal Muscle Leg	muscle
14	chr10:97243000-97253400	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr10:97244200-97253200	Weak transcription	Lung	lung
16	chr10:97245400-97259200	Weak transcription	Brain Substantia Nigra	brain
17	chr10:97245400-97264600	Weak transcription	Ovary	ovary
18	chr10:97245800-97254000	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr10:97245800-97259400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr10:97246200-97256600	Weak transcription	Brain Cingulate Gyrus	brain
21	chr10:97246400-97256000	Weak transcription	HSMMtube	muscle
22	chr10:97247400-97259800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr10:97247600-97253400	Weak transcription	Placenta	Placenta
24	chr10:97249000-97253200	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr10:97249400-97261200	Weak transcription	Fetal Brain Female	brain
26	chr10:97249800-97253200	Weak transcription	Fetal Intestine Large	intestine
27	chr10:97249800-97274000	Weak transcription	Spleen	Spleen
28	chr10:97250000-97258800	Weak transcription	Rectal Mucosa Donor 29	rectum
29	chr10:97250600-97253400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
30	chr10:97251000-97253600	Weak transcription	HUES48 Cell Line	embryonic stem cell
31	chr10:97251200-97254000	Weak transcription	H1 Cell Line	embryonic stem cell
32	chr10:97251200-97268200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
33	chr10:97251400-97253400	Weak transcription	Brain Anterior Caudate	brain
34	chr10:97251600-97253400	Weak transcription	HepG2	liver
35	chr10:97252200-97253000	Strong transcription	Fetal Intestine Small	intestine
36	chr10:97252200-97253800	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
37	chr10:97252200-97254200	Enhancers	Stomach Mucosa	stomach
38	chr10:97252200-97254400	Enhancers	Right Ventricle	heart
39	chr10:97252200-97254600	Enhancers	Brain Angular Gyrus	brain
40	chr10:97252200-97254600	Enhancers	Gastric	stomach
41	chr10:97252200-97254600	Enhancers	Pancreas	Pancrea
42	chr10:97252200-97255600	Enhancers	Fetal Heart	heart
43	chr10:97252200-97255600	Enhancers	Left Ventricle	heart
44	chr10:97252400-97254400	Enhancers	Right Atrium	heart
45	chr10:97252400-97254400	Enhancers	Skeletal Muscle Female	skeletal muscle
46	chr10:97252400-97254600	Enhancers	Psoas Muscle	Psoas
47	chr10:97252400-97254600	Genic enhancers	Stomach Smooth Muscle	stomach
48	chr10:97252400-97255200	Enhancers	K562	blood
49	chr10:97252400-97262000	Weak transcription	Fetal Lung	lung
50	chr10:97252600-97253800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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