Variant report

No.	Distal block	Cell Line	Cell type
1	chr14:81692029..81695563-chr14:81697137..81699977,3	K562	blood:
2	chr14:81683519..81693455-chr14:81706363..81723125,33	MCF-7	breast:
3	chr14:81691775..81692400-chr14:81703764..81704509,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000205579	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10131728	0.81[EUR][1000 genomes]
rs12878339	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12878477	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12878503	0.97[EUR][1000 genomes]
rs12879576	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12880377	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12880414	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12880512	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12883359	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12883532	0.81[EUR][1000 genomes]
rs12884270	0.81[AMR][1000 genomes]
rs12891586	0.89[AMR][1000 genomes]
rs12891828	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12892815	0.89[AMR][1000 genomes]
rs12892839	0.89[AMR][1000 genomes]
rs12893436	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12894001	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12894318	0.91[EUR][1000 genomes]
rs12895990	0.97[EUR][1000 genomes]
rs17630746	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35446669	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832841	chr14:81588322-81743921	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	86 gene(s)	inside rSNPs	diseases
2	nsv902118	chr14:81679650-81715989	Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	84 gene(s)	inside rSNPs	n/a
3	esv3530694	chr14:81691626-81693527	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
4	esv3530695	chr14:81691626-81693527	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81688200-81704800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:81688600-81693200	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr14:81688800-81700600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr14:81689400-81700600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr14:81689600-81693800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr14:81691400-81692400	Enhancers	Ovary	ovary

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