The 2.0 version of rSNPBase

Variant report

Variant rs4651397
Chromosome Location chr1:175189065-175189066
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175178400-175191400 Weak transcription Spleen Spleen
2 chr1:175184200-175190400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:175185400-175190000 Weak transcription Fetal Lung lung
4 chr1:175186200-175189600 Enhancers Primary B cells from peripheral blood blood
5 chr1:175186200-175191600 Enhancers Fetal Intestine Large intestine
6 chr1:175186400-175189800 Enhancers Primary B cells from cord blood blood
7 chr1:175186400-175191600 Enhancers Fetal Intestine Small intestine
8 chr1:175186400-175192000 Enhancers Skeletal Muscle Male skeletal muscle
9 chr1:175186600-175191800 Enhancers Adipose Nuclei Adipose
10 chr1:175186800-175189200 Enhancers Fetal Thymus thymus
11 chr1:175187000-175192000 Enhancers Fetal Muscle Leg muscle
12 chr1:175187600-175190000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:175187600-175190000 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr1:175187800-175189200 Enhancers Primary T cells from cord blood blood
15 chr1:175187800-175190000 Enhancers NHEK skin
16 chr1:175187800-175190400 Enhancers HMEC breast
17 chr1:175187800-175192200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:175187800-175192400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:175188000-175190000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:175188000-175192600 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr1:175188200-175189600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:175188200-175195000 Enhancers Placenta Placenta
23 chr1:175188400-175189400 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:175188400-175189400 Enhancers HUVEC blood vessel
25 chr1:175188400-175190000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr1:175188400-175190000 Weak transcription Right Atrium heart
27 chr1:175188400-175190200 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr1:175188400-175190400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:175188400-175190600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr1:175188600-175189200 Enhancers K562 blood
31 chr1:175188600-175190000 Weak transcription Fetal Muscle Trunk muscle
32 chr1:175188600-175190000 Weak transcription Psoas Muscle Psoas
33 chr1:175188800-175189200 Enhancers Duodenum Mucosa Duodenum
34 chr1:175188800-175189400 Enhancers Primary T helper cells PMA-I stimulated --
35 chr1:175188800-175189600 Enhancers Primary T helper cells fromperipheralblood blood
36 chr1:175188800-175189800 Weak transcription Left Ventricle heart
37 chr1:175188800-175191600 Weak transcription Lung lung
38 chr1:175188800-175194200 Weak transcription GM12878-XiMat blood
39 chr1:175189000-175189400 Enhancers Primary neutrophils fromperipheralblood blood
40 chr1:175189000-175189400 Enhancers Primary hematopoietic stem cells short term culture blood
41 chr1:175189000-175189600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:175189000-175190200 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015