Variant report

Variant	rs4669634
Chromosome Location	chr2:10976827-10976828
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:10971180..10977465-chr2:11267266..11272931,15	MCF-7	breast:
2	chr2:10974186..10977004-chr2:11049663..11052630,3	MCF-7	breast:
3	chr2:10973920..10977755-chr2:11268417..11271773,4	K562	blood:

Variant related genes	Relation type
ENSG00000162975	Chromatin interaction
ENSG00000145063	Chromatin interaction

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10184655	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11903377	0.82[ASN][1000 genomes]
rs1565321	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1565322	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1565323	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1631885	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1632749	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1686469	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1686470	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1686471	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1686473	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1686474	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1686475	0.94[ASN][1000 genomes]
rs1686476	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1686477	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734367	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1734371	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734372	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734373	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734374	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734375	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734376	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734377	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734378	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734379	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734380	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734381	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1734382	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1734383	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1734384	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1734385	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1734386	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1734387	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1734388	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1734389	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1734393	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1734394	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2357817	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2952623	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2952625	0.89[ASN][1000 genomes]
rs2969888	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4669633	0.82[AFR][1000 genomes]
rs923453	0.80[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:10972200-10978800	Enhancers	Fetal Brain Male	brain
2	chr2:10973000-10980200	Weak transcription	Right Atrium	heart
3	chr2:10974400-10977400	Weak transcription	Brain Cingulate Gyrus	brain
4	chr2:10974800-10977000	Weak transcription	Brain Angular Gyrus	brain
5	chr2:10975400-10978400	Active TSS	Brain Anterior Caudate	brain
6	chr2:10975600-10977200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr2:10975600-10977600	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr2:10976800-10977800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr2:10976800-10979200	Enhancers	Fetal Brain Female	brain

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