Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr2:39143739-39143851	HepG2	liver:	n/a	chr2:39143808-39143819

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:39142232..39144316-chr2:39150087..39151609,2	MCF-7	breast:
2	chr2:38975980..38978607-chr2:39143778..39145437,2	K562	blood:

Variant related genes	Relation type
ARHGEF33	TF binding region
ENSG00000115875	Chromatin interaction

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10204999	0.96[ASN][1000 genomes]
rs10779923	0.94[CHB][hapmap];0.86[CHD][hapmap];0.86[JPT][hapmap];0.92[LWK][hapmap];0.91[MKK][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs11124655	0.85[ASN][1000 genomes]
rs12621073	0.89[ASN][1000 genomes]
rs12623330	0.84[CEU][hapmap];0.83[CHB][hapmap]
rs12712625	0.81[CEU][hapmap];0.89[CHB][hapmap];0.87[YRI][hapmap]
rs12712627	0.81[CEU][hapmap];0.89[CHB][hapmap];0.87[YRI][hapmap]
rs13029388	0.81[CEU][hapmap];0.89[CHB][hapmap];0.87[YRI][hapmap]
rs1868867	0.89[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs1901289	0.96[CEU][hapmap];0.94[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.89[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2060743	0.83[CHB][hapmap]
rs3099959	0.89[CHB][hapmap]
rs373300	0.94[CHB][hapmap];0.86[JPT][hapmap];0.87[YRI][hapmap];0.86[ASN][1000 genomes]
rs389023	0.93[ASN][1000 genomes]
rs390008	0.90[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs4265996	0.92[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4670899	0.83[CHB][hapmap]
rs6544180	0.90[ASN][1000 genomes]
rs6706091	0.83[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.86[ASN][1000 genomes]
rs6706186	0.89[ASN][1000 genomes]
rs6744514	0.83[CHB][hapmap];0.86[YRI][hapmap]
rs7586929	0.84[AMR][1000 genomes]
rs7598922	0.84[CEU][hapmap];0.83[CHB][hapmap];0.87[YRI][hapmap]
rs9808136	0.83[CHB][hapmap];0.84[YRI][hapmap]
rs986019	0.80[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4670267	DHX57	cis	multi-tissue	Pritchard

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:39110200-39186800	Weak transcription	Stomach Smooth Muscle	stomach
2	chr2:39139600-39150000	Weak transcription	Psoas Muscle	Psoas
3	chr2:39142000-39150000	Weak transcription	Right Ventricle	heart
4	chr2:39143000-39151000	Weak transcription	Brain Angular Gyrus	brain
5	chr2:39143800-39164600	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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