The 2.0 version of rSNPBase

Variant report

Variant rs4680522
Chromosome Location chr3:159500294-159500295
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:159484200-159501200 Weak transcription Placenta Amnion Placenta Amnion
2 chr3:159484400-159505400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr3:159484600-159500400 Weak transcription Fetal Intestine Small intestine
4 chr3:159490200-159501400 Weak transcription Aorta Aorta
5 chr3:159493400-159500600 Weak transcription Gastric stomach
6 chr3:159493600-159504400 Weak transcription Right Atrium heart
7 chr3:159493600-159505200 Weak transcription Lung lung
8 chr3:159493600-159505400 Weak transcription Fetal Stomach stomach
9 chr3:159493600-159509200 Weak transcription Fetal Muscle Trunk muscle
10 chr3:159493600-159516200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr3:159493800-159502800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr3:159494800-159503000 Weak transcription NHDF-Ad bronchial
13 chr3:159495000-159502000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr3:159495000-159503000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr3:159495000-159503200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr3:159495200-159501400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr3:159495200-159502000 Weak transcription Muscle Satellite Cultured Cells --
18 chr3:159495200-159502600 Weak transcription HUVEC blood vessel
19 chr3:159495200-159503000 Weak transcription NHLF lung
20 chr3:159495200-159503200 Weak transcription Adipose Nuclei Adipose
21 chr3:159495200-159504400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr3:159495200-159504600 Weak transcription HSMMtube muscle
23 chr3:159496400-159501000 Genic enhancers Breast Myoepithelial Primary Cells Breast
24 chr3:159497800-159501000 Weak transcription Colon Smooth Muscle Colon
25 chr3:159498000-159500600 Weak transcription Osteobl bone
26 chr3:159498200-159500600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr3:159498200-159501400 Enhancers Right Ventricle heart
28 chr3:159498200-159501600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr3:159498400-159501200 Weak transcription NH-A brain
30 chr3:159498600-159501200 Weak transcription HSMM muscle
31 chr3:159498600-159504400 Weak transcription Esophagus oesophagus
32 chr3:159498800-159500600 Weak transcription Left Ventricle heart
33 chr3:159499200-159502600 Enhancers Stomach Smooth Muscle stomach
34 chr3:159499400-159501400 Enhancers Brain Substantia Nigra brain
35 chr3:159499400-159501400 Enhancers HMEC breast
36 chr3:159499400-159501600 Enhancers Liver Liver
37 chr3:159499400-159502400 Enhancers Brain Angular Gyrus brain
38 chr3:159499600-159500400 Weak transcription Brain Anterior Caudate brain
39 chr3:159499600-159500400 Enhancers A549 lung
40 chr3:159499600-159501200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr3:159499600-159501200 Enhancers NHEK skin
42 chr3:159499600-159501800 Weak transcription Fetal Kidney kidney
43 chr3:159499600-159501800 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr3:159499800-159501000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr3:159499800-159501000 Enhancers Rectal Mucosa Donor 31 rectum
46 chr3:159499800-159501200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr3:159499800-159501200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr3:159499800-159503400 Enhancers Brain Cingulate Gyrus brain
49 chr3:159499800-159506400 Enhancers Brain Inferior Temporal Lobe brain
50 chr3:159500000-159500800 Enhancers Stomach Mucosa stomach

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Last update: Aug 31, 2015