The 2.0 version of rSNPBase

Variant report

Variant rs16830741
Chromosome Location chr3:159487198-159487199
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:159483600-159493000 Weak transcription Gastric stomach
2 chr3:159483800-159488000 Weak transcription Spleen Spleen
3 chr3:159483800-159493200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr3:159484000-159488200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr3:159484000-159494600 Weak transcription Psoas Muscle Psoas
6 chr3:159484200-159493200 Weak transcription Lung lung
7 chr3:159484200-159501200 Weak transcription Placenta Amnion Placenta Amnion
8 chr3:159484400-159488000 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr3:159484400-159493000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr3:159484400-159493000 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr3:159484400-159493000 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr3:159484400-159493200 Weak transcription Fetal Stomach stomach
13 chr3:159484400-159505400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr3:159484600-159487200 Weak transcription Fetal Intestine Large intestine
15 chr3:159484600-159500400 Weak transcription Fetal Intestine Small intestine
16 chr3:159484800-159488400 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr3:159484800-159489800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr3:159484800-159493000 Weak transcription HSMMtube muscle
19 chr3:159485000-159488200 Weak transcription Brain Anterior Caudate brain
20 chr3:159485000-159492600 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr3:159485000-159492800 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr3:159485000-159493000 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr3:159485400-159488400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr3:159485600-159489600 Weak transcription Aorta Aorta
25 chr3:159485600-159493000 Weak transcription Muscle Satellite Cultured Cells --
26 chr3:159485600-159493000 Weak transcription HMEC breast
27 chr3:159485600-159493400 Weak transcription Fetal Brain Female brain
28 chr3:159485800-159488400 Weak transcription A549 lung
29 chr3:159485800-159488400 Weak transcription Osteobl bone
30 chr3:159485800-159489000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr3:159485800-159493000 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr3:159486200-159487200 Enhancers Brain Angular Gyrus brain
33 chr3:159486200-159488400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr3:159486200-159489000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr3:159486200-159492200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr3:159486400-159491000 Weak transcription HUVEC blood vessel
37 chr3:159486600-159488400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr3:159486600-159488800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr3:159486600-159489600 Weak transcription HSMM muscle
40 chr3:159486600-159493200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr3:159486800-159487600 Weak transcription Brain Substantia Nigra brain
42 chr3:159486800-159487600 Weak transcription Colon Smooth Muscle Colon
43 chr3:159486800-159487800 Weak transcription Brain Cingulate Gyrus brain
44 chr3:159486800-159487800 Weak transcription Brain Hippocampus Middle brain
45 chr3:159486800-159488000 Weak transcription Brain Inferior Temporal Lobe brain
46 chr3:159486800-159488400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr3:159486800-159488400 Weak transcription Rectal Smooth Muscle rectum
48 chr3:159486800-159488800 Weak transcription NHDF-Ad bronchial
49 chr3:159486800-159489600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr3:159486800-159489800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015