Variant report

Variant	rs4696637
Chromosome Location	chr4:151768004-151768005
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:151761121..151762860-chr4:151766741..151768585,2	K562	blood:

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10004115	0.83[AFR][1000 genomes]
rs10013523	0.87[EUR][1000 genomes]
rs10034695	0.87[EUR][1000 genomes]
rs10857249	0.87[EUR][1000 genomes]
rs10857251	0.83[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs11099775	0.89[EUR][1000 genomes]
rs1148645	0.98[EUR][1000 genomes]
rs1148652	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1148656	0.92[AFR][1000 genomes]
rs1201198	0.98[EUR][1000 genomes]
rs1201214	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1289963	0.98[AFR][1000 genomes]
rs13112801	0.98[ASN][1000 genomes]
rs13121304	0.89[EUR][1000 genomes]
rs13145181	0.89[EUR][1000 genomes]
rs13340305	0.81[AFR][1000 genomes]
rs17027116	0.81[AFR][1000 genomes]
rs1947315	0.87[EUR][1000 genomes]
rs2198190	0.84[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs28558492	0.83[AFR][1000 genomes]
rs28630451	0.84[AFR][1000 genomes]
rs294528	0.98[AFR][1000 genomes]
rs4336207	0.89[EUR][1000 genomes]
rs4696636	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6535754	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6825077	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6836854	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6838530	0.84[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs6841524	0.89[EUR][1000 genomes]
rs7666190	0.87[EUR][1000 genomes]
rs7672144	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7690485	0.89[EUR][1000 genomes]
rs7690977	0.98[ASN][1000 genomes]
rs7698070	0.91[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs9884181	0.87[EUR][1000 genomes]
rs9884963	0.87[EUR][1000 genomes]
rs9996572	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:24 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817540	chr4:151228965-151858609	Strong transcription Active TSS Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1024820	chr4:151364078-151943561	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
3	nsv1032070	chr4:151514664-151775259	Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv1034948	chr4:151590115-152202687	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
5	nsv537302	chr4:151590115-152202687	ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
6	nsv530159	chr4:151624865-152203910	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
7	nsv1018404	chr4:151664438-152067409	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
8	nsv1017850	chr4:151664438-152071876	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
9	esv2763837	chr4:151664438-152071888	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
10	nsv870257	chr4:151665349-152072867	Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
11	nsv1015387	chr4:151673751-152071876	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
12	nsv526976	chr4:151675819-152055073	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
13	nsv1025077	chr4:151682266-152035733	Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
14	nsv537303	chr4:151682266-152035733	Strong transcription Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
15	nsv949066	chr4:151693149-152069566	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
16	nsv949002	chr4:151693149-152095109	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
17	nsv948719	chr4:151693149-152161625	Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
18	nsv1031720	chr4:151708502-152071876	Strong transcription Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
19	nsv880262	chr4:151712054-152519899	Enhancers Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
20	nsv1031516	chr4:151718614-152065644	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
21	nsv537304	chr4:151718614-152065644	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
22	nsv1022884	chr4:151718814-152065505	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
23	nsv537305	chr4:151718814-152065505	Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
24	nsv880576	chr4:151751369-151936149	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:108 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:151724400-151770600	Weak transcription	A549	lung
2	chr4:151726600-151780400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr4:151735000-151773000	Weak transcription	Hela-S3	cervix
4	chr4:151737200-151775000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr4:151737400-151772800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr4:151738400-151770400	Weak transcription	Brain Substantia Nigra	brain
7	chr4:151738400-151775200	Weak transcription	Osteobl	bone
8	chr4:151740000-151773600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr4:151743800-151772800	Weak transcription	Placenta	Placenta
10	chr4:151743800-151795600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr4:151745000-151780600	Weak transcription	Colon Smooth Muscle	Colon
12	chr4:151746400-151775000	Weak transcription	HSMM	muscle
13	chr4:151746800-151770000	Weak transcription	NHEK	skin
14	chr4:151748400-151774600	Weak transcription	Small Intestine	intestine
15	chr4:151748400-151795600	Weak transcription	Brain Angular Gyrus	brain
16	chr4:151749400-151775200	Weak transcription	NH-A	brain
17	chr4:151749600-151770400	Weak transcription	HUVEC	blood vessel
18	chr4:151749600-151770600	Weak transcription	Primary monocytes fromperipheralblood	blood
19	chr4:151749600-151772400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr4:151749800-151768800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr4:151749800-151769400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
22	chr4:151749800-151769800	Weak transcription	HMEC	breast
23	chr4:151749800-151770600	Weak transcription	Fetal Kidney	kidney
24	chr4:151749800-151772000	Weak transcription	Dnd41	blood
25	chr4:151749800-151773000	Weak transcription	Stomach Smooth Muscle	stomach
26	chr4:151749800-151773200	Weak transcription	Brain Hippocampus Middle	brain
27	chr4:151749800-151773200	Weak transcription	HepG2	liver
28	chr4:151749800-151774600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr4:151749800-151775000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr4:151749800-151775800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
31	chr4:151749800-151779800	Weak transcription	Aorta	Aorta
32	chr4:151749800-151780800	Weak transcription	Brain Anterior Caudate	brain
33	chr4:151749800-151787800	Weak transcription	Skeletal Muscle Male	skeletal muscle
34	chr4:151749800-151795400	Weak transcription	Right Ventricle	heart
35	chr4:151749800-151795600	Weak transcription	Brain Cingulate Gyrus	brain
36	chr4:151749800-151795600	Weak transcription	Gastric	stomach
37	chr4:151749800-151806800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr4:151750200-151770400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
39	chr4:151750200-151824200	Weak transcription	H9 Cell Line	embryonic stem cell
40	chr4:151750400-151795800	Weak transcription	Fetal Stomach	stomach
41	chr4:151750800-151795600	Weak transcription	Thymus	Thymus
42	chr4:151754200-151795400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
43	chr4:151756000-151773200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr4:151759600-151784200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr4:151760400-151772000	Weak transcription	Spleen	Spleen
46	chr4:151761000-151770600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr4:151761000-151774000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
48	chr4:151761200-151770600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
49	chr4:151761400-151780000	Weak transcription	Fetal Lung	lung
50	chr4:151761800-151770400	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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