Variant report
Variant | rs4697227 |
---|---|
Chromosome Location | chr4:21663995-21663996 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10011740 | 0.81[ASN][1000 genomes] |
rs11737456 | 1.00[JPT][hapmap] |
rs12507996 | 1.00[JPT][hapmap] |
rs1394135 | 1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
rs1394136 | 1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
rs16871492 | 1.00[JPT][hapmap] |
rs16871499 | 1.00[JPT][hapmap] |
rs16871502 | 1.00[JPT][hapmap] |
rs16871505 | 1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
rs16871508 | 1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
rs16871511 | 1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
rs16871514 | 0.81[ASN][1000 genomes] |
rs41397149 | 1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
rs41463847 | 1.00[JPT][hapmap] |
rs41500944 | 1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
rs56155919 | 0.81[ASN][1000 genomes] |
rs56408419 | 0.81[ASN][1000 genomes] |
rs6448062 | 1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
rs6824711 | 0.81[ASN][1000 genomes] |
rs6840297 | 1.00[CHB][hapmap];0.83[CHD][hapmap];1.00[JPT][hapmap] |
rs6843682 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs6843752 | 1.00[JPT][hapmap] |
rs6843837 | 1.00[JPT][hapmap] |
rs6848885 | 1.00[JPT][hapmap] |
rs6849321 | 1.00[JPT][hapmap] |
rs73252266 | 0.81[ASN][1000 genomes] |
rs73252267 | 0.81[ASN][1000 genomes] |
rs73252268 | 0.81[ASN][1000 genomes] |
rs73252269 | 0.81[ASN][1000 genomes] |
rs73252271 | 0.81[ASN][1000 genomes] |
rs73252272 | 0.81[ASN][1000 genomes] |
rs73252288 | 0.81[ASN][1000 genomes] |
rs73252289 | 0.81[ASN][1000 genomes] |
rs73252290 | 0.81[ASN][1000 genomes] |
rs73254304 | 0.81[ASN][1000 genomes] |
rs73254305 | 0.81[ASN][1000 genomes] |
rs73254306 | 0.81[ASN][1000 genomes] |
rs73254307 | 0.81[ASN][1000 genomes] |
rs73254310 | 0.81[ASN][1000 genomes] |
rs73254311 | 0.81[ASN][1000 genomes] |
rs73254313 | 0.81[ASN][1000 genomes] |
rs73254386 | 0.81[ASN][1000 genomes] |
rs7654710 | 1.00[JPT][hapmap] |
rs7655708 | 1.00[JPT][hapmap] |
rs7657287 | 0.81[ASN][1000 genomes] |
rs7657482 | 1.00[JPT][hapmap] |
rs7670800 | 1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
rs7677329 | 1.00[JPT][hapmap] |
rs7679874 | 1.00[JPT][hapmap];0.81[ASN][1000 genomes] |
rs7681243 | 0.81[ASN][1000 genomes] |
rs7681823 | 0.81[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv829880 | chr4:21492426-21693816 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
2 | nsv817467 | chr4:21602921-22422816 | Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
No data |