Variant report

Variant	rs4729999
Chromosome Location	chr7:103996982-103996983
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10254423	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10953426	0.84[AFR][1000 genomes]
rs1465197	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1468141	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs2188491	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2385234	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4729996	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs4730000	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6465983	0.82[AFR][1000 genomes]
rs7787976	0.96[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap]
rs7787988	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs7788386	0.89[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap]
rs7794488	0.93[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap]
rs7800144	0.93[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv608067	chr7:103944237-104029408	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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