Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130361706..130364062-chr8:130364764..130367218,2	K562	blood:

Variant related genes	Relation type
ENSG00000229140	Chromatin interaction

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10505536	0.81[ASN][1000 genomes]
rs12056871	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13258902	0.82[ASN][1000 genomes]
rs13280005	0.81[ASN][1000 genomes]
rs1835849	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1835850	0.83[ASN][1000 genomes]
rs2099290	0.83[ASN][1000 genomes]
rs2099291	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2099292	0.83[ASN][1000 genomes]
rs2436206	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2568441	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2568442	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2568444	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2568446	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2568448	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2568449	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2568451	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2568452	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2579854	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2579855	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2579859	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2719190	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2719192	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2719193	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7003796	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7004036	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs891837	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831460	chr8:130185680-130366217	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130341200-130363000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:130355000-130368400	Strong transcription	K562	blood
3	chr8:130356200-130365000	Weak transcription	Ovary	ovary
4	chr8:130357400-130362200	Weak transcription	Fetal Thymus	thymus
5	chr8:130357400-130363200	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr8:130357800-130364600	Weak transcription	Thymus	Thymus
7	chr8:130361600-130362800	Weak transcription	Dnd41	blood
8	chr8:130361600-130368400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr8:130361600-130370800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr8:130361800-130371000	Weak transcription	Primary monocytes fromperipheralblood	blood

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