Variant report
Variant | rs474084 |
---|---|
Chromosome Location | chr2:141368605-141368606 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10188432 | 1.00[CHB][hapmap] |
rs11891221 | 1.00[CHB][hapmap] |
rs11897270 | 1.00[CHB][hapmap] |
rs12990666 | 1.00[CHB][hapmap] |
rs12999683 | 1.00[CHB][hapmap] |
rs13003828 | 1.00[CHB][hapmap] |
rs13007837 | 1.00[CHB][hapmap] |
rs13030114 | 1.00[CHB][hapmap] |
rs1401117 | 1.00[CHB][hapmap] |
rs1518443 | 1.00[CHB][hapmap] |
rs1518444 | 1.00[CHB][hapmap] |
rs1518445 | 1.00[CHB][hapmap] |
rs1518446 | 1.00[CHB][hapmap] |
rs16843964 | 1.00[CHB][hapmap] |
rs16843975 | 1.00[CHB][hapmap] |
rs16843984 | 1.00[CHB][hapmap] |
rs16843999 | 1.00[CHB][hapmap] |
rs16844001 | 1.00[CHB][hapmap] |
rs17387299 | 1.00[CHB][hapmap] |
rs1878741 | 1.00[CHB][hapmap] |
rs1878742 | 1.00[CHB][hapmap] |
rs1949452 | 1.00[CHB][hapmap] |
rs2030240 | 1.00[CHB][hapmap] |
rs2030241 | 1.00[CHB][hapmap] |
rs4293513 | 1.00[CHB][hapmap] |
rs474837 | 0.87[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs487419 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[YRI][hapmap] |
rs491391 | 1.00[CHB][hapmap];0.89[YRI][hapmap];0.92[AFR][1000 genomes];0.94[EUR][1000 genomes] |
rs492190 | 1.00[CHB][hapmap];0.89[YRI][hapmap];0.92[AFR][1000 genomes];0.94[EUR][1000 genomes] |
rs494227 | 0.92[AFR][1000 genomes];0.94[EUR][1000 genomes] |
rs503742 | 0.82[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.95[AFR][1000 genomes];0.97[EUR][1000 genomes] |
rs524037 | 1.00[EUR][1000 genomes] |
rs538467 | 0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs540307 | 0.92[AFR][1000 genomes];0.94[EUR][1000 genomes] |
rs6723181 | 1.00[CHB][hapmap] |
rs6730266 | 1.00[CHB][hapmap] |
rs6744731 | 1.00[CHB][hapmap] |
rs6747180 | 1.00[CHB][hapmap] |
rs7581949 | 1.00[CHB][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv583193 | chr2:141365171-141415043 | Active TSS Enhancers Weak transcription Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | n/a |
No data |