Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10828875	0.81[ASN][1000 genomes]
rs11014761	0.81[ASN][1000 genomes]
rs11014762	0.81[CEU][hapmap];0.83[MEX][hapmap]
rs17744957	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2437401	0.93[ASN][1000 genomes]
rs2437413	0.81[ASN][1000 genomes]
rs2437414	0.86[ASN][1000 genomes]
rs2437415	0.83[ASN][1000 genomes]
rs2437416	0.99[ASN][1000 genomes]
rs2437419	0.98[ASN][1000 genomes]
rs2505439	0.92[ASN][1000 genomes]
rs2505492	0.99[ASN][1000 genomes]
rs2917191	0.97[ASN][1000 genomes]
rs4747544	0.84[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs7067925	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7071770	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7075716	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7094275	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7098327	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs751006	0.81[CEU][hapmap]
rs751007	0.81[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894974	chr10:26028530-26322783	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1051756	chr10:26092320-26277478	Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26088200-26106600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr10:26100400-26104000	Weak transcription	NH-A	brain
3	chr10:26100400-26104600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr10:26101000-26104400	Weak transcription	Brain Germinal Matrix	brain

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