Variant report

Variant	rs4749215
Chromosome Location	chr10:27312005-27312006
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:27310436..27312955-chr10:27315082..27316856,2	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10741125	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10764662	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10829165	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11015463	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2368204	0.84[EUR][1000 genomes]
rs6415983	0.92[ASN][1000 genomes]
rs6482586	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6482587	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6482588	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7079807	0.84[ASN][1000 genomes]
rs7096505	0.84[ASN][1000 genomes]
rs7902540	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:111 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:27257600-27319000	Weak transcription	Stomach Smooth Muscle	stomach
2	chr10:27283200-27388400	Weak transcription	Psoas Muscle	Psoas
3	chr10:27285000-27319200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr10:27285400-27319200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr10:27286400-27316600	Weak transcription	Duodenum Mucosa	Duodenum
6	chr10:27287000-27350600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr10:27287800-27350600	Weak transcription	Aorta	Aorta
8	chr10:27288400-27329400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr10:27288800-27357000	Weak transcription	Gastric	stomach
10	chr10:27289200-27361200	Weak transcription	Brain Cingulate Gyrus	brain
11	chr10:27289600-27312400	Weak transcription	Brain Substantia Nigra	brain
12	chr10:27289600-27314200	Weak transcription	Spleen	Spleen
13	chr10:27289600-27318800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
14	chr10:27289600-27360800	Weak transcription	Hela-S3	cervix
15	chr10:27289800-27360800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
16	chr10:27290200-27351400	Weak transcription	Thymus	Thymus
17	chr10:27290200-27361400	Weak transcription	Placenta	Placenta
18	chr10:27290600-27314800	Weak transcription	Fetal Kidney	kidney
19	chr10:27290800-27326800	Weak transcription	Osteobl	bone
20	chr10:27291000-27312200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr10:27291200-27316600	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr10:27291200-27324000	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr10:27291400-27324000	Weak transcription	Brain Germinal Matrix	brain
24	chr10:27291400-27324200	Weak transcription	Primary hematopoietic stem cells	blood
25	chr10:27291400-27360600	Weak transcription	Lung	lung
26	chr10:27291600-27312600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr10:27291600-27314600	Weak transcription	Sigmoid Colon	Sigmoid Colon
28	chr10:27291600-27316400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr10:27291600-27321200	Weak transcription	Fetal Intestine Small	intestine
30	chr10:27291600-27325200	Weak transcription	Brain Inferior Temporal Lobe	brain
31	chr10:27291600-27331200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr10:27291600-27351000	Weak transcription	NHLF	lung
33	chr10:27291600-27388000	Weak transcription	Small Intestine	intestine
34	chr10:27291800-27325600	Weak transcription	Primary B cells from cord blood	blood
35	chr10:27292000-27362200	Weak transcription	Fetal Brain Male	brain
36	chr10:27292200-27334800	Weak transcription	Colon Smooth Muscle	Colon
37	chr10:27292600-27312200	Weak transcription	Brain Anterior Caudate	brain
38	chr10:27292800-27315800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
39	chr10:27293000-27312400	Weak transcription	HUES48 Cell Line	embryonic stem cell
40	chr10:27293600-27340200	Weak transcription	A549	lung
41	chr10:27294400-27314800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
42	chr10:27295400-27319000	Weak transcription	HepG2	liver
43	chr10:27295600-27319200	Weak transcription	Ovary	ovary
44	chr10:27295600-27328800	Weak transcription	Rectal Mucosa Donor 31	rectum
45	chr10:27295600-27345800	Weak transcription	Brain Angular Gyrus	brain
46	chr10:27296000-27316600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr10:27298800-27328800	Weak transcription	Muscle Satellite Cultured Cells	--
48	chr10:27302000-27319000	Weak transcription	Fetal Brain Female	brain
49	chr10:27303600-27361000	Weak transcription	Rectal Smooth Muscle	rectum
50	chr10:27304800-27329000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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