The 2.0 version of rSNPBase

Variant report

Variant rs4826411
Chromosome Location chrX:55746645-55746646
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chrX:55743600-55747600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chrX:55744800-55747600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chrX:55744800-55763200 Weak transcription Aorta Aorta
4 chrX:55744800-55763600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chrX:55744800-55774600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chrX:55745000-55746800 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chrX:55745000-55763400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chrX:55745200-55746800 Enhancers Primary T cells from cord blood blood
9 chrX:55745200-55746800 Enhancers Primary T regulatory cells fromperipheralblood blood
10 chrX:55745200-55747000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chrX:55745200-55747000 Weak transcription Fetal Muscle Trunk muscle
12 chrX:55745200-55747400 Weak transcription Primary T cells fromperipheralblood blood
13 chrX:55745200-55747400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chrX:55745200-55747400 Weak transcription Fetal Thymus thymus
15 chrX:55745200-55747400 Weak transcription Rectal Mucosa Donor 31 rectum
16 chrX:55745200-55747400 Weak transcription Skeletal Muscle Male skeletal muscle
17 chrX:55745200-55749200 Weak transcription Fetal Stomach stomach
18 chrX:55745200-55750000 Weak transcription Ovary ovary
19 chrX:55745200-55756000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chrX:55745200-55756200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chrX:55745200-55756200 Weak transcription Lung lung
22 chrX:55745200-55756200 Weak transcription NHLF lung
23 chrX:55745200-55756400 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chrX:55745200-55756400 Weak transcription Brain Germinal Matrix brain
25 chrX:55745200-55757400 Weak transcription Fetal Lung lung
26 chrX:55745200-55757600 Weak transcription Left Ventricle heart
27 chrX:55745200-55758000 Weak transcription Placenta Placenta
28 chrX:55745200-55758200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chrX:55745200-55758600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chrX:55745200-55763200 Weak transcription Pancreas Pancrea
31 chrX:55745200-55763400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chrX:55745200-55763600 Weak transcription Gastric stomach
33 chrX:55745200-55763800 Weak transcription Esophagus oesophagus
34 chrX:55745200-55765000 Weak transcription Colonic Mucosa Colon
35 chrX:55745200-55773400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chrX:55745200-55781200 Weak transcription Placenta Amnion Placenta Amnion
37 chrX:55745200-55785800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chrX:55745400-55746800 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chrX:55745400-55747000 Weak transcription Fetal Muscle Leg muscle
40 chrX:55745400-55747200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chrX:55745400-55747400 Weak transcription Brain Inferior Temporal Lobe brain
42 chrX:55745400-55747600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chrX:55745400-55747600 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chrX:55745400-55747600 Weak transcription Fetal Kidney kidney
45 chrX:55745400-55749200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chrX:55745400-55749200 Weak transcription Fetal Intestine Large intestine
47 chrX:55745400-55754400 Weak transcription Brain Hippocampus Middle brain
48 chrX:55745400-55755200 Weak transcription Stomach Smooth Muscle stomach
49 chrX:55745400-55756000 Weak transcription H1 Cell Line embryonic stem cell
50 chrX:55745400-55756000 Weak transcription Osteobl bone

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Last update: Aug 31, 2015