Variant report

Variant	rs6612359
Chromosome Location	chrX:55770521-55770522
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs1325572	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs1473760	1.00[YRI][hapmap]
rs1473761	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs2375465	1.00[CEU][hapmap]
rs4826411	1.00[CEU][hapmap]
rs5913857	1.00[YRI][hapmap]
rs5913859	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs5913861	1.00[CEU][hapmap]
rs5914428	1.00[YRI][hapmap]
rs5914434	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs5914436	1.00[YRI][hapmap]
rs5914440	1.00[YRI][hapmap]
rs5960093	1.00[YRI][hapmap]
rs5960480	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs6611425	1.00[CEU][hapmap]

Chromatin state (count:108 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:55744800-55774600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chrX:55745200-55773400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
3	chrX:55745200-55781200	Weak transcription	Placenta Amnion	Placenta Amnion
4	chrX:55745200-55785800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chrX:55745400-55789800	Weak transcription	NHDF-Ad	bronchial
6	chrX:55745400-55791000	Weak transcription	Psoas Muscle	Psoas
7	chrX:55745400-55791000	Weak transcription	HSMMtube	muscle
8	chrX:55745600-55770800	Weak transcription	K562	blood
9	chrX:55745800-55782800	Weak transcription	Fetal Brain Male	brain
10	chrX:55745800-55792600	Weak transcription	Colon Smooth Muscle	Colon
11	chrX:55745800-55793000	Weak transcription	NH-A	brain
12	chrX:55746000-55790200	Weak transcription	Small Intestine	intestine
13	chrX:55747400-55773800	Strong transcription	Monocytes-CD14+_RO01746	blood
14	chrX:55749400-55784800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
15	chrX:55753200-55782400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
16	chrX:55754600-55774200	Strong transcription	Primary monocytes fromperipheralblood	blood
17	chrX:55757000-55783600	Weak transcription	HUVEC	blood vessel
18	chrX:55757400-55771000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chrX:55757600-55773400	Weak transcription	H1 Cell Line	embryonic stem cell
20	chrX:55758800-55780000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chrX:55758800-55793000	Weak transcription	Osteobl	bone
22	chrX:55759800-55773800	Weak transcription	HUES64 Cell Line	embryonic stem cell
23	chrX:55760200-55784600	Weak transcription	A549	lung
24	chrX:55761400-55772200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chrX:55761400-55772200	Strong transcription	Duodenum Mucosa	Duodenum
26	chrX:55761400-55773800	Strong transcription	Duodenum Smooth Muscle	Duodenum
27	chrX:55761400-55774200	Strong transcription	Liver	Liver
28	chrX:55762200-55773200	Weak transcription	Fetal Kidney	kidney
29	chrX:55763000-55773800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chrX:55763200-55772200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chrX:55763600-55774200	Strong transcription	Primary B cells from peripheral blood	blood
32	chrX:55764000-55771200	Weak transcription	Stomach Mucosa	stomach
33	chrX:55765200-55792800	Weak transcription	Fetal Heart	heart
34	chrX:55765400-55779800	Weak transcription	Left Ventricle	heart
35	chrX:55765800-55772400	Weak transcription	Ovary	ovary
36	chrX:55765800-55778200	Weak transcription	Placenta	Placenta
37	chrX:55765800-55778800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chrX:55765800-55782400	Weak transcription	Colonic Mucosa	Colon
39	chrX:55765800-55787000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
40	chrX:55765800-55791200	Weak transcription	Skeletal Muscle Male	skeletal muscle
41	chrX:55766000-55771200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chrX:55766000-55771200	Weak transcription	Brain Angular Gyrus	brain
43	chrX:55766000-55771200	Weak transcription	Brain Inferior Temporal Lobe	brain
44	chrX:55766000-55771200	Weak transcription	Lung	lung
45	chrX:55766000-55771400	Weak transcription	Fetal Brain Female	brain
46	chrX:55766000-55771800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
47	chrX:55766000-55772000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
48	chrX:55766000-55772200	Weak transcription	Aorta	Aorta
49	chrX:55766000-55773000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
50	chrX:55766000-55778800	Weak transcription	Skeletal Muscle Female	skeletal muscle

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