Variant report

Variant	rs4832228
Chromosome Location	chr2:86165385-86165386
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11691934	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2033770	0.82[ASN][1000 genomes]
rs2033771	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2366955	0.82[ASN][1000 genomes]
rs6547649	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86160800-86166800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr2:86161400-86166200	Weak transcription	Ovary	ovary
3	chr2:86163400-86166000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr2:86163800-86165600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr2:86164200-86165400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr2:86164200-86165400	Weak transcription	Brain Hippocampus Middle	brain
7	chr2:86164200-86169200	Weak transcription	Pancreas	Pancrea
8	chr2:86164200-86169400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr2:86164600-86166800	Enhancers	Liver	Liver
10	chr2:86164800-86165400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr2:86164800-86166200	Enhancers	A549	lung
12	chr2:86164800-86168400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr2:86165000-86167600	Weak transcription	Spleen	Spleen
14	chr2:86165200-86165400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr2:86165200-86166400	Enhancers	HUVEC	blood vessel

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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