Variant report

Variant	rs2033771
Chromosome Location	chr2:86167716-86167717
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11691934	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12714159	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1370699	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs17026728	0.80[JPT][hapmap]
rs2033770	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2196701	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs2218036	0.99[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs2366955	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2366957	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs2438307	0.83[CHB][hapmap]
rs3770093	0.81[JPT][hapmap]
rs4832228	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4832230	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs6547649	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6711420	0.91[AMR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86164200-86169200	Weak transcription	Pancreas	Pancrea
2	chr2:86164200-86169400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr2:86164800-86168400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr2:86167600-86167800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr2:86167600-86167800	Enhancers	Spleen	Spleen
6	chr2:86167600-86168400	Enhancers	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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