The 2.0 version of rSNPBase

Variant report

Variant rs4835945
Chromosome Location chr5:127526481-127526482
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:127441200-127536800 Weak transcription Colonic Mucosa Colon
2 chr5:127457600-127534400 Weak transcription Pancreas Pancrea
3 chr5:127463200-127533000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr5:127465400-127532200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr5:127468000-127536800 Weak transcription Fetal Brain Female brain
6 chr5:127478600-127531600 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr5:127479200-127532200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr5:127480600-127532400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr5:127480600-127534400 Weak transcription Gastric stomach
10 chr5:127485000-127536800 Weak transcription Colon Smooth Muscle Colon
11 chr5:127488600-127533200 Weak transcription Stomach Mucosa stomach
12 chr5:127490400-127532800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr5:127490800-127529200 Weak transcription Aorta Aorta
14 chr5:127490800-127536600 Weak transcription Brain Cingulate Gyrus brain
15 chr5:127492200-127527200 Weak transcription NHDF-Ad bronchial
16 chr5:127493200-127529200 Weak transcription Psoas Muscle Psoas
17 chr5:127494400-127526800 Weak transcription Fetal Lung lung
18 chr5:127494400-127534800 Weak transcription Liver Liver
19 chr5:127494400-127536800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:127494600-127534400 Weak transcription HUVEC blood vessel
21 chr5:127498400-127532200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr5:127499000-127532400 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr5:127499000-127533400 Weak transcription GM12878-XiMat blood
24 chr5:127499200-127534600 Weak transcription Lung lung
25 chr5:127499400-127528400 Weak transcription Fetal Intestine Small intestine
26 chr5:127500400-127532400 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr5:127500400-127536800 Weak transcription NHEK skin
28 chr5:127504600-127536800 Weak transcription Rectal Smooth Muscle rectum
29 chr5:127508400-127533200 Weak transcription A549 lung
30 chr5:127510000-127532600 Weak transcription Fetal Heart heart
31 chr5:127511000-127532400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr5:127511400-127535000 Weak transcription Muscle Satellite Cultured Cells --
33 chr5:127513000-127529200 Strong transcription Duodenum Mucosa Duodenum
34 chr5:127514000-127529200 Weak transcription HSMMtube muscle
35 chr5:127514400-127533000 Weak transcription NHLF lung
36 chr5:127515400-127528600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr5:127515600-127529400 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr5:127515600-127533200 Weak transcription Fetal Muscle Leg muscle
39 chr5:127516400-127528200 Weak transcription Fetal Stomach stomach
40 chr5:127516400-127536800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr5:127516600-127534600 Weak transcription HMEC breast
42 chr5:127516800-127534400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr5:127517200-127526800 Weak transcription Primary monocytes fromperipheralblood blood
44 chr5:127517400-127532200 Weak transcription K562 blood
45 chr5:127517600-127526600 Weak transcription Brain Hippocampus Middle brain
46 chr5:127518800-127527600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr5:127520400-127528200 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr5:127520400-127534800 Weak transcription HSMM muscle
49 chr5:127521000-127527800 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr5:127521200-127537200 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015