Variant report

Variant rs4845374
Chromosome Location chr1:154426947-154426948
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:154414800-154436000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:154416200-154435800 Strong transcription Liver Liver
3 chr1:154417400-154428000 Strong transcription Skeletal Muscle Male skeletal muscle
4 chr1:154418000-154428000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:154418000-154440000 Weak transcription Small Intestine intestine
6 chr1:154418600-154432800 Strong transcription Rectal Mucosa Donor 29 rectum
7 chr1:154419200-154427200 Weak transcription Ovary ovary
8 chr1:154419200-154432200 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:154419200-154435800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:154420800-154428000 Strong transcription Colon Smooth Muscle Colon
11 chr1:154421800-154431800 Strong transcription Rectal Smooth Muscle rectum
12 chr1:154422600-154434400 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:154422600-154437600 Weak transcription Pancreas Pancrea
14 chr1:154424200-154427000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr1:154424400-154427800 Genic enhancers Primary monocytes fromperipheralblood blood
16 chr1:154424800-154436000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr1:154425000-154429000 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr1:154425000-154437200 Weak transcription Fetal Stomach stomach
19 chr1:154425600-154427000 Enhancers Cortex derived primary cultured neurospheres brain
20 chr1:154425600-154427200 Genic enhancers Breast Myoepithelial Primary Cells Breast
21 chr1:154425600-154428200 Enhancers Primary B cells from cord blood blood
22 chr1:154425800-154427000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:154425800-154427000 Enhancers HMEC breast
24 chr1:154425800-154427200 Genic enhancers Primary T helper naive cells fromperipheralblood blood
25 chr1:154425800-154427200 Genic enhancers Primary T helper cells PMA-I stimulated --
26 chr1:154425800-154427200 Enhancers Fetal Thymus thymus
27 chr1:154425800-154427200 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
28 chr1:154425800-154427400 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
29 chr1:154426000-154427000 Enhancers Primary hematopoietic stem cells blood
30 chr1:154426000-154427800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:154426000-154427800 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
32 chr1:154426000-154434200 Weak transcription Placenta Placenta
33 chr1:154426000-154436200 Weak transcription Brain Cingulate Gyrus brain
34 chr1:154426200-154427800 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr1:154426200-154427800 Strong transcription Left Ventricle heart
36 chr1:154426200-154428600 Strong transcription Gastric stomach
37 chr1:154426200-154431000 Strong transcription Sigmoid Colon Sigmoid Colon
38 chr1:154426200-154433600 Strong transcription Skeletal Muscle Female skeletal muscle
39 chr1:154426200-154434400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:154426200-154436000 Weak transcription Brain Inferior Temporal Lobe brain
41 chr1:154426400-154427000 Genic enhancers NHEK skin
42 chr1:154426400-154427200 Weak transcription Right Ventricle heart
43 chr1:154426400-154427800 Strong transcription Rectal Mucosa Donor 31 rectum
44 chr1:154426400-154427800 Strong transcription Spleen Spleen
45 chr1:154426400-154427800 Enhancers GM12878-XiMat blood
46 chr1:154426400-154428000 Strong transcription Duodenum Smooth Muscle Duodenum
47 chr1:154426400-154429000 Weak transcription Brain Hippocampus Middle brain
48 chr1:154426400-154432000 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr1:154426400-154432800 Strong transcription Lung lung
50 chr1:154426400-154434800 Strong transcription Stomach Smooth Muscle stomach

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