The 2.0 version of rSNPBase

Variant report

Variant rs4852893
Chromosome Location chr2:73041727-73041728
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:73022400-73042200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr2:73034000-73049600 Weak transcription Right Atrium heart
3 chr2:73034400-73051600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:73036200-73042400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:73036200-73050000 Weak transcription Esophagus oesophagus
6 chr2:73036200-73050600 Weak transcription Left Ventricle heart
7 chr2:73036400-73050800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr2:73036400-73051400 Weak transcription Fetal Intestine Small intestine
9 chr2:73036600-73051800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr2:73037000-73042800 Weak transcription HepG2 liver
11 chr2:73037200-73051800 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr2:73037400-73042800 Weak transcription Hela-S3 cervix
13 chr2:73037400-73047200 Weak transcription Fetal Lung lung
14 chr2:73037600-73045800 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr2:73038200-73044600 Weak transcription Right Ventricle heart
16 chr2:73038200-73051200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:73038400-73045600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr2:73038400-73048400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr2:73038400-73051200 Weak transcription Fetal Stomach stomach
20 chr2:73038400-73052000 Weak transcription Aorta Aorta
21 chr2:73039600-73041800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr2:73040000-73041800 Enhancers Brain Cingulate Gyrus brain
23 chr2:73040200-73041800 Enhancers Brain Hippocampus Middle brain
24 chr2:73040200-73048200 Weak transcription Brain Germinal Matrix brain
25 chr2:73040400-73044800 Weak transcription Ovary ovary
26 chr2:73040600-73042000 Enhancers A549 lung
27 chr2:73040800-73041800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr2:73040800-73041800 Enhancers Primary T helper cells PMA-I stimulated --
29 chr2:73040800-73041800 Enhancers Muscle Satellite Cultured Cells --
30 chr2:73040800-73041800 Enhancers Brain Substantia Nigra brain
31 chr2:73040800-73041800 Enhancers NHEK skin
32 chr2:73041000-73041800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr2:73041000-73049400 Weak transcription Brain Angular Gyrus brain
34 chr2:73041200-73041800 Enhancers Primary T cells from cord blood blood
35 chr2:73041400-73041800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr2:73041400-73049800 Weak transcription Brain Inferior Temporal Lobe brain
37 chr2:73041400-73051400 Weak transcription HSMM muscle
38 chr2:73041600-73043800 Weak transcription Fetal Heart heart
39 chr2:73041600-73048400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr2:73041600-73049200 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr2:73041600-73049400 Weak transcription HMEC breast
42 chr2:73041600-73049800 Weak transcription Brain Anterior Caudate brain
43 chr2:73041600-73050800 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr2:73041600-73051200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr2:73041600-73051200 Weak transcription NHDF-Ad bronchial
46 chr2:73041600-73051400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr2:73041600-73051600 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015