The 2.0 version of rSNPBase

Variant report

Variant rs6546782
Chromosome Location chr2:72943892-72943893
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72905800-72984400 Weak transcription Aorta Aorta
2 chr2:72913400-72945000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr2:72917000-72950000 Weak transcription Brain Angular Gyrus brain
4 chr2:72917200-72946200 Weak transcription HMEC breast
5 chr2:72917400-72944800 Weak transcription NHEK skin
6 chr2:72920400-72945000 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr2:72922000-72946200 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr2:72922400-72945800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr2:72922400-72949800 Weak transcription Fetal Brain Female brain
10 chr2:72922400-72972000 Weak transcription Right Ventricle heart
11 chr2:72922400-72976200 Weak transcription Psoas Muscle Psoas
12 chr2:72922600-72951000 Weak transcription Fetal Muscle Leg muscle
13 chr2:72922800-72949600 Weak transcription Muscle Satellite Cultured Cells --
14 chr2:72923000-72944600 Weak transcription Fetal Lung lung
15 chr2:72923000-72945600 Weak transcription Fetal Stomach stomach
16 chr2:72923000-72972800 Weak transcription Brain Inferior Temporal Lobe brain
17 chr2:72923000-73008600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr2:72923200-72946000 Weak transcription A549 lung
19 chr2:72923600-72958200 Weak transcription Brain Cingulate Gyrus brain
20 chr2:72924000-72945200 Weak transcription Ovary ovary
21 chr2:72927600-72946200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr2:72929000-72951200 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr2:72930400-72946200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:72931400-72946200 Weak transcription Esophagus oesophagus
25 chr2:72933600-72946200 Weak transcription Pancreas Pancrea
26 chr2:72934200-72946200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr2:72934600-72945800 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr2:72935200-72944600 Weak transcription Primary B cells from peripheral blood blood
29 chr2:72935600-72946200 Weak transcription Small Intestine intestine
30 chr2:72936000-72944800 Weak transcription Fetal Kidney kidney
31 chr2:72937200-72974200 Weak transcription Brain Hippocampus Middle brain
32 chr2:72937400-72946200 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr2:72937600-72944200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr2:72937600-72946400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr2:72937800-72945800 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr2:72937800-72946600 Weak transcription Brain Anterior Caudate brain
37 chr2:72937800-72978400 Weak transcription Brain Germinal Matrix brain
38 chr2:72938000-72945600 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr2:72938000-72946600 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr2:72938000-72949800 Weak transcription HSMMtube muscle
41 chr2:72938200-72946600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr2:72938200-72949400 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr2:72938200-72950200 Weak transcription Stomach Mucosa stomach
44 chr2:72938200-72950200 Weak transcription HSMM muscle
45 chr2:72938200-72987800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr2:72938400-72946200 Weak transcription Colon Smooth Muscle Colon
47 chr2:72938600-72950800 Weak transcription Duodenum Mucosa Duodenum
48 chr2:72938800-72946200 Weak transcription HUVEC blood vessel
49 chr2:72939400-72944000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr2:72939800-72944600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015