The 2.0 version of rSNPBase

Variant report

Variant rs11126372
Chromosome Location chr2:72730418-72730419
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72691600-72741800 Weak transcription Colon Smooth Muscle Colon
2 chr2:72692400-72742000 Weak transcription Small Intestine intestine
3 chr2:72699600-72744600 Weak transcription Liver Liver
4 chr2:72700200-72742600 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr2:72702600-72743600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr2:72703000-72736400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr2:72703200-72731000 Weak transcription Left Ventricle heart
8 chr2:72703200-72732600 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr2:72703200-72732600 Weak transcription Lung lung
10 chr2:72703200-72735800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr2:72703200-72742800 Weak transcription HSMM muscle
12 chr2:72703200-72743000 Weak transcription Pancreas Pancrea
13 chr2:72703200-72743400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr2:72703200-72743800 Weak transcription Brain Anterior Caudate brain
15 chr2:72703400-72741800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr2:72703400-72744200 Weak transcription A549 lung
17 chr2:72703400-72752200 Weak transcription Duodenum Mucosa Duodenum
18 chr2:72703600-72745000 Weak transcription Fetal Intestine Large intestine
19 chr2:72707800-72731000 Weak transcription Aorta Aorta
20 chr2:72707800-72742800 Weak transcription Fetal Heart heart
21 chr2:72708000-72744600 Weak transcription Fetal Lung lung
22 chr2:72708200-72737000 Weak transcription Ovary ovary
23 chr2:72708600-72741800 Weak transcription Stomach Smooth Muscle stomach
24 chr2:72716000-72742400 Weak transcription Brain Hippocampus Middle brain
25 chr2:72719200-72745600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr2:72719600-72732000 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr2:72719600-72735400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr2:72719600-72736000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr2:72721800-72736000 Weak transcription NH-A brain
30 chr2:72723400-72736400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr2:72725400-72743000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr2:72725600-72732000 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr2:72725600-72739600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:72725600-72743000 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr2:72725800-72743600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr2:72726400-72739600 Weak transcription Placenta Placenta
37 chr2:72727000-72743600 Weak transcription Adipose Nuclei Adipose
38 chr2:72729200-72732400 Weak transcription Fetal Intestine Small intestine
39 chr2:72729800-72742800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr2:72730200-72732200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015