The 2.0 version of rSNPBase

Variant report

Variant rs4887004
Chromosome Location chr15:78370940-78370941
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78370000-78372400 Weak transcription Spleen Spleen
2 chr15:78370400-78371800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr15:78370400-78372200 Weak transcription Ovary ovary
4 chr15:78370400-78372200 Weak transcription Pancreas Pancrea
5 chr15:78370400-78373600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr15:78370400-78374000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr15:78370400-78374200 Weak transcription Colonic Mucosa Colon
8 chr15:78370400-78374800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr15:78370400-78374800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr15:78370400-78374800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr15:78370400-78375000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr15:78370400-78375000 Weak transcription Gastric stomach
13 chr15:78370400-78375000 Weak transcription Lung lung
14 chr15:78370400-78375000 Weak transcription Small Intestine intestine
15 chr15:78370400-78375600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr15:78370400-78376600 Weak transcription Right Atrium heart
17 chr15:78370400-78377000 Weak transcription Esophagus oesophagus
18 chr15:78370600-78371000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
19 chr15:78370600-78371400 Enhancers Primary neutrophils fromperipheralblood blood
20 chr15:78370600-78371600 Weak transcription Stomach Mucosa stomach
21 chr15:78370600-78371800 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr15:78370600-78374000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr15:78370600-78374000 Weak transcription Primary monocytes fromperipheralblood blood
24 chr15:78370600-78374000 Weak transcription Placenta Placenta
25 chr15:78370600-78374000 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr15:78370600-78374200 Weak transcription Fetal Muscle Leg muscle
27 chr15:78370600-78374600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr15:78370600-78374600 Weak transcription Primary B cells from cord blood blood
29 chr15:78370600-78374600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr15:78370600-78374600 Weak transcription Adipose Nuclei Adipose
31 chr15:78370600-78374600 Weak transcription Fetal Stomach stomach
32 chr15:78370600-78374600 Weak transcription NHDF-Ad bronchial
33 chr15:78370600-78374600 Weak transcription NHEK skin
34 chr15:78370600-78374600 Weak transcription NHLF lung
35 chr15:78370600-78374800 Weak transcription Primary hematopoietic stem cells blood
36 chr15:78370600-78374800 Weak transcription Fetal Lung lung
37 chr15:78370600-78375000 Weak transcription Stomach Smooth Muscle stomach
38 chr15:78370600-78375200 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr15:78370600-78376200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr15:78370600-78376200 Weak transcription Fetal Brain Female brain
41 chr15:78370600-78377800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr15:78370600-78377800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr15:78370600-78378000 Weak transcription Osteobl bone
44 chr15:78370800-78371000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr15:78370800-78371000 Enhancers Skeletal Muscle Female skeletal muscle
46 chr15:78370800-78371200 Weak transcription Fetal Intestine Large intestine
47 chr15:78370800-78371200 Weak transcription Fetal Intestine Small intestine
48 chr15:78370800-78371800 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr15:78370800-78371800 Enhancers HepG2 liver
50 chr15:78370800-78372000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015