Variant report

Variant	rs4896648
Chromosome Location	chr6:143671494-143671495
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs12527836	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13213970	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1345990	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1345993	0.92[EUR][1000 genomes]
rs1424925	0.92[EUR][1000 genomes]
rs1424926	0.92[EUR][1000 genomes]
rs1424927	0.92[EUR][1000 genomes]
rs1424928	0.92[EUR][1000 genomes]
rs1424929	0.92[EUR][1000 genomes]
rs1424930	0.92[EUR][1000 genomes]
rs1424932	0.92[EUR][1000 genomes]
rs2216918	0.91[EUR][1000 genomes]
rs2328477	0.94[ASN][1000 genomes]
rs4645437	0.92[EUR][1000 genomes]
rs4896647	0.98[AFR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4896651	0.92[EUR][1000 genomes]
rs6570556	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6570557	0.92[EUR][1000 genomes]
rs6914161	0.94[ASN][1000 genomes]
rs6922572	0.92[EUR][1000 genomes]
rs6928185	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9373389	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9390084	0.93[EUR][1000 genomes]
rs9403489	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9496592	0.92[EUR][1000 genomes]
rs972151	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs974754	0.91[EUR][1000 genomes]
rs989696	0.92[EUR][1000 genomes]
rs993442	0.92[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143642600-143675600	Weak transcription	Left Ventricle	heart
2	chr6:143645000-143683200	Weak transcription	Pancreas	Pancrea
3	chr6:143654000-143672000	Weak transcription	Ovary	ovary
4	chr6:143662800-143675600	Weak transcription	Liver	Liver
5	chr6:143670800-143673000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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