Variant report

Variant	rs4924050
Chromosome Location	chr15:34880567-34880568
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr15:34880090-34880650	HCT-116	colon:	n/a	chr15:34880361-34880382 chr15:34880366-34880384
2	RAD21	chr15:34880022-34880632	HepG2	liver:	n/a	chr15:34880364-34880383
3	ARID3A	chr15:34880209-34880840	HepG2	liver:	n/a	n/a
4	POLR2A	chr15:34880407-34880787	U87	brain:	n/a	n/a
5	E2F6	chr15:34880464-34880870	H1-hESC	embryonic stem cell:	n/a	n/a
6	ZNF143	chr15:34880219-34880570	K562	blood:	n/a	n/a
7	CTCF	chr15:34880161-34880567	K562	blood:	n/a	chr15:34880361-34880382 chr15:34880366-34880384
8	POLR2A	chr15:34880467-34880812	A549	lung:	n/a	n/a
9	MYC	chr15:34880246-34880897	K562	blood:	n/a	n/a
10	POU2F2	chr15:34880547-34880673	GM12878	blood:	n/a	n/a
11	POLR2A	chr15:34880541-34880706	H1-hESC	embryonic stem cell:	n/a	n/a
12	YY1	chr15:34880453-34880823	ECC-1	luminal epithelium:	n/a	n/a
13	MAZ	chr15:34880435-34880864	HepG2	liver:	n/a	n/a
14	MAX	chr15:34880511-34880982	ECC-1	luminal epithelium:	n/a	n/a
15	ZBTB33	chr15:34880394-34880992	SK-N-SH	brain:	n/a	chr15:34880707-34880722
16	YY1	chr15:34880406-34880757	GM12892	blood:	n/a	n/a
17	YY1	chr15:34880553-34880707	K562	blood:	n/a	n/a
18	PML	chr15:34880512-34880726	GM12878	blood:	n/a	n/a
19	RAD21	chr15:34880103-34880669	ECC-1	luminal epithelium:	n/a	chr15:34880364-34880383
20	MAFF	chr15:34880338-34880900	K562	blood:	n/a	n/a
21	POLR2A	chr15:34880304-34880819	K562	blood:	n/a	n/a
22	TAF7	chr15:34880456-34880821	H1-hESC	embryonic stem cell:	n/a	n/a
23	POLR2A	chr15:34880372-34880786	K562	blood:	n/a	n/a
24	CHD2	chr15:34880285-34880928	HepG2	liver:	n/a	n/a
25	ZBTB33	chr15:34880476-34880934	HepG2	liver:	n/a	chr15:34880707-34880722
26	YY1	chr15:34880425-34880802	K562	blood:	n/a	n/a
27	CTCF	chr15:34880155-34880656	IMR90	lung:	n/a	chr15:34880361-34880382 chr15:34880366-34880384
28	ZBTB33	chr15:34880413-34880878	GM12878	blood:	n/a	chr15:34880707-34880722
29	ZBTB33	chr15:34880449-34880919	HCT-116	colon:	n/a	chr15:34880707-34880722
30	TEAD4	chr15:34880216-34880718	K562	blood:	n/a	n/a
31	ATF2	chr15:34880257-34880906	GM12878	blood:	n/a	n/a
32	CTCF	chr15:34880187-34880575	A549	lung:	n/a	chr15:34880361-34880382 chr15:34880366-34880384
33	REST	chr15:34880210-34880993	A549	lung:	n/a	n/a
34	POLR2A	chr15:34880431-34880827	K562	blood:	n/a	n/a
35	SP1	chr15:34880264-34880996	A549	lung:	n/a	n/a
36	CTCF	chr15:34880094-34880694	HCT-116	colon:	n/a	chr15:34880361-34880382 chr15:34880366-34880384
37	POLR2A	chr15:34880433-34880765	HCT-116	colon:	n/a	n/a
38	YY1	chr15:34880318-34880786	HepG2	liver:	n/a	n/a
39	MAX	chr15:34880319-34880933	K562	blood:	n/a	n/a
40	POLR2A	chr15:34880561-34880808	MCF-7	breast:	n/a	n/a
41	MAX	chr15:34880565-34880895	H1-hESC	embryonic stem cell:	n/a	n/a
42	MAX	chr15:34880561-34880897	K562	blood:	n/a	n/a
43	MAX	chr15:34880387-34881055	A549	lung:	n/a	n/a
44	POLR2A	chr15:34880222-34880819	IMR90	lung:	n/a	n/a
45	YY1	chr15:34880201-34880793	H1-hESC	embryonic stem cell:	n/a	n/a
46	YY1	chr15:34880210-34880854	GM12878	blood:	n/a	n/a
47	YY1	chr15:34880256-34880825	H1-hESC	embryonic stem cell:	n/a	n/a
48	MYC	chr15:34880267-34880909	MCF10A-Er-Src	breast:	n/a	n/a
49	YY1	chr15:34880205-34880848	SK-N-SH_RA	brain:	n/a	n/a
50	POLR2A	chr15:34880400-34880869	Gliobla	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:34727885..34731466-chr15:34878887..34881950,4	K562	blood:
2	chr15:34873722..34878608-chr15:34878671..34882990,11	K562	blood:
3	chr15:34727095..34731466-chr15:34878887..34881950,4	K562	blood:
4	chr15:34875762..34878300-chr15:34879087..34881803,6	K562	blood:
5	chr15:34632776..34635331-chr15:34879472..34881728,2	K562	blood:
6	chr15:34513565..34517614-chr15:34877827..34881077,3	K562	blood:

Variant related genes	Relation type
GOLGA8B	TF binding region
ENSG00000175265	Chromatin interaction
ENSG00000182117	Chromatin interaction
ENSG00000215252	Chromatin interaction
ENSG00000128463	Chromatin interaction

Extended variants
information (count: 82 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10775224	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12441187	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12592118	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12908448	0.83[ASN][1000 genomes]
rs12910280	0.83[ASN][1000 genomes]
rs2081566	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2433271	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2879515	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6495689	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8039908	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs890389	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:71 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1798578	chr15:34543021-34988247	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
2	esv1804312	chr15:34543021-34988247	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
3	esv1821622	chr15:34543021-34988247	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
4	esv1850950	chr15:34543021-34988247	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
5	esv2758376	chr15:34543021-34988247	Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
6	esv2760024	chr15:34543021-34988247	Flanking Active TSS Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
7	nsv428303	chr15:34543021-34988247	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
8	nsv471682	chr15:34560451-34882630	Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
9	esv1817014	chr15:34598601-34911177	Flanking Active TSS Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
10	esv1817924	chr15:34598601-34911177	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
11	esv1847172	chr15:34598601-34911177	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
12	esv1802396	chr15:34598601-34988247	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
13	esv1809360	chr15:34598601-34988247	Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Weak transcription Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
14	esv1844776	chr15:34598601-34988247	Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
15	nsv427957	chr15:34598601-34988247	Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
16	nsv1039577	chr15:34624178-34962093	Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
17	nsv542344	chr15:34624178-34962093	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
18	nsv916680	chr15:34627109-34964198	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
19	esv1822549	chr15:34628041-34909164	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
20	nsv1038524	chr15:34628041-34962093	Flanking Bivalent TSS/Enh Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
21	nsv542347	chr15:34628041-34962093	Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
22	nsv1042687	chr15:34635218-35000806	Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
23	esv1843690	chr15:34641090-34909164	Weak transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
24	nsv1485	chr15:34646207-34893740	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
25	esv2757595	chr15:34660416-34900472	Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
26	esv3350109	chr15:34668106-35534229	Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
27	nsv1040900	chr15:34669056-35033073	Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
28	nsv1054985	chr15:34669056-35042772	Bivalent Enhancer Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
29	esv1807088	chr15:34671118-34887073	Active TSS Weak transcription Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
30	esv1818510	chr15:34682800-34886991	Flanking Active TSS Active TSS Weak transcription Genic enhancers Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
31	esv1812470	chr15:34685677-34889491	Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
32	esv1845648	chr15:34685677-34889491	Flanking Active TSS Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
33	esv1811120	chr15:34686143-34882808	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
34	esv1806482	chr15:34686143-34915356	Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
35	nsv542349	chr15:34694965-34939290	Bivalent/Poised TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
36	nsv917358	chr15:34695140-34964198	Enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
37	nsv542352	chr15:34695165-34939151	Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
38	nsv1053063	chr15:34695165-35009028	Enhancers Active TSS Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
39	nsv542353	chr15:34695165-35009028	Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
40	esv1810277	chr15:34698843-34889691	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
41	esv1851644	chr15:34698843-34889691	Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
42	nsv568987	chr15:34706951-34982384	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
43	nsv569005	chr15:34718594-35032856	Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
44	nsv569010	chr15:34718805-34897191	Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
45	nsv569023	chr15:34722632-34982384	Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
46	esv1802552	chr15:34724212-34882808	Strong transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
47	nsv569058	chr15:34729951-34982384	Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
48	nsv569069	chr15:34730758-34971983	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
49	nsv569070	chr15:34730758-34981944	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
50	nsv569071	chr15:34730758-34982384	Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4924050	GOLGA8A	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:81 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34876800-34880600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
2	chr15:34876800-34880600	Weak transcription	Esophagus	oesophagus
3	chr15:34880000-34881000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr15:34880200-34880600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr15:34880200-34880600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr15:34880200-34880600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr15:34880200-34880600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr15:34880200-34880600	Active TSS	HUVEC	blood vessel
9	chr15:34880200-34880800	Active TSS	HUES6 Cell Line	embryonic stem cell
10	chr15:34880200-34880800	Active TSS	HUES64 Cell Line	embryonic stem cell
11	chr15:34880200-34880800	Enhancers	Liver	Liver
12	chr15:34880200-34881000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr15:34880200-34881000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr15:34880200-34881000	Active TSS	Muscle Satellite Cultured Cells	--
15	chr15:34880200-34881000	Active TSS	Pancreatic Islets	Pancreatic Islet
16	chr15:34880200-34881000	Active TSS	A549	lung
17	chr15:34880200-34881000	Active TSS	K562	blood
18	chr15:34880400-34880600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr15:34880400-34880600	Enhancers	Primary T cells fromperipheralblood	blood
20	chr15:34880400-34880600	Active TSS	Primary hematopoietic stem cells	blood
21	chr15:34880400-34880600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
22	chr15:34880400-34880600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
23	chr15:34880400-34880600	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
24	chr15:34880400-34880600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
25	chr15:34880400-34880600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr15:34880400-34880600	Active TSS	Adipose Nuclei	Adipose
27	chr15:34880400-34880600	Active TSS	Duodenum Mucosa	Duodenum
28	chr15:34880400-34880600	Active TSS	Fetal Brain Female	brain
29	chr15:34880400-34880600	Flanking Active TSS	Fetal Kidney	kidney
30	chr15:34880400-34880600	Active TSS	Rectal Mucosa Donor 31	rectum
31	chr15:34880400-34880600	Active TSS	Right Atrium	heart
32	chr15:34880400-34880600	Active TSS	Skeletal Muscle Female	skeletal muscle
33	chr15:34880400-34880600	Active TSS	HepG2	liver
34	chr15:34880400-34880600	Active TSS	HSMMtube	muscle
35	chr15:34880400-34880600	Bivalent/Poised TSS	Monocytes-CD14+_RO01746	blood
36	chr15:34880400-34880600	Active TSS	Osteobl	bone
37	chr15:34880400-34880800	Active TSS	H1 Cell Line	embryonic stem cell
38	chr15:34880400-34880800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr15:34880400-34880800	Active TSS	iPS-15b Cell Line	embryonic stem cell
40	chr15:34880400-34880800	Active TSS	Breast Myoepithelial Primary Cells	Breast
41	chr15:34880400-34880800	Enhancers	Primary monocytes fromperipheralblood	blood
42	chr15:34880400-34880800	Enhancers	Primary B cells from peripheral blood	blood
43	chr15:34880400-34880800	Active TSS	Primary hematopoietic stem cells short term culture	blood
44	chr15:34880400-34880800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
45	chr15:34880400-34880800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
46	chr15:34880400-34880800	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
47	chr15:34880400-34880800	Enhancers	Primary T helper cells fromperipheralblood	blood
48	chr15:34880400-34880800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
49	chr15:34880400-34880800	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr15:34880400-34880800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin

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