Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:48338058..48339804-chr13:48349149..48350961,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10507561	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1924803	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2077433	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs4119501	0.96[ASN][1000 genomes]
rs4119502	0.96[ASN][1000 genomes]
rs4942691	0.90[ASN][1000 genomes]
rs4942692	0.90[ASN][1000 genomes]
rs4942694	1.00[ASN][1000 genomes]
rs59890896	0.90[ASN][1000 genomes]
rs61972192	0.96[ASN][1000 genomes]
rs61975710	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7324861	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7326753	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs7981324	0.96[ASN][1000 genomes]
rs7982387	0.82[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7988528	0.81[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7989376	0.96[ASN][1000 genomes]
rs9526394	0.90[ASN][1000 genomes]
rs9526395	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9526396	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs9534812	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9534822	0.99[ASN][1000 genomes]
rs9534830	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3510679	chr13:48236624-48498185	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3510680	chr13:48236624-48498185	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv561589	chr13:48251736-48420218	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:48347400-48349800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr13:48348200-48350000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr13:48348400-48350000	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr13:48348400-48350200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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