The 2.0 version of rSNPBase

Variant report

Variant rs4941710
Chromosome Location chr13:52233244-52233245
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52219600-52253800 Weak transcription Psoas Muscle Psoas
2 chr13:52219800-52233800 Weak transcription A549 lung
3 chr13:52220400-52259000 Weak transcription Thymus Thymus
4 chr13:52220600-52233400 Weak transcription Ovary ovary
5 chr13:52220600-52233400 Weak transcription Right Atrium heart
6 chr13:52220600-52236400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr13:52220800-52233600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr13:52221000-52235800 Weak transcription HSMM muscle
9 chr13:52221200-52253800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr13:52221600-52233400 Weak transcription Osteobl bone
11 chr13:52221600-52238000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr13:52228400-52247000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr13:52228600-52238200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr13:52228600-52238200 Weak transcription Pancreas Pancrea
15 chr13:52228600-52238600 Weak transcription Aorta Aorta
16 chr13:52228600-52248000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr13:52228600-52254000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr13:52228800-52236200 Weak transcription Lung lung
19 chr13:52228800-52236400 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr13:52228800-52236400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr13:52228800-52238200 Weak transcription H9 Cell Line embryonic stem cell
22 chr13:52229000-52248400 Weak transcription H1 Cell Line embryonic stem cell
23 chr13:52229400-52236400 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr13:52229600-52234200 Enhancers HepG2 liver
25 chr13:52229800-52236200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr13:52230000-52237800 Weak transcription NHEK skin
27 chr13:52231000-52236400 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr13:52231600-52237600 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr13:52231600-52242800 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr13:52231600-52249600 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr13:52231800-52234800 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr13:52231800-52237800 Weak transcription Primary T cells from cord blood blood
33 chr13:52231800-52242400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr13:52231800-52244000 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr13:52232000-52238200 Weak transcription Brain Anterior Caudate brain
36 chr13:52232200-52261800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr13:52232400-52234000 Enhancers Left Ventricle heart
38 chr13:52232400-52234800 Weak transcription Primary B cells from peripheral blood blood
39 chr13:52232400-52237400 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr13:52232600-52234800 Weak transcription Primary monocytes fromperipheralblood blood
41 chr13:52232800-52236000 Weak transcription Primary hematopoietic stem cells blood
42 chr13:52232800-52238200 Weak transcription HMEC breast
43 chr13:52232800-52238600 Weak transcription Primary B cells from cord blood blood
44 chr13:52232800-52256400 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr13:52233000-52233800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr13:52233000-52234800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr13:52233000-52235000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr13:52233000-52236000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr13:52233000-52236400 Weak transcription Muscle Satellite Cultured Cells --
50 chr13:52233000-52238200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015