The 2.0 version of rSNPBase

Variant report

Variant rs9563066
Chromosome Location chr13:52176195-52176196
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52160200-52181400 Weak transcription Thymus Thymus
2 chr13:52160400-52177000 Weak transcription Right Ventricle heart
3 chr13:52162800-52180200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr13:52163200-52182600 Weak transcription Ovary ovary
5 chr13:52165600-52188600 Weak transcription Fetal Stomach stomach
6 chr13:52165800-52179000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr13:52166000-52176400 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr13:52166000-52181200 Weak transcription NH-A brain
9 chr13:52166200-52178800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr13:52166200-52181200 Weak transcription NHLF lung
11 chr13:52166400-52176200 Weak transcription Osteobl bone
12 chr13:52166400-52181200 Weak transcription Hela-S3 cervix
13 chr13:52167600-52179800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr13:52168400-52177400 Weak transcription Lung lung
15 chr13:52168400-52194400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr13:52168600-52177600 Enhancers Primary monocytes fromperipheralblood blood
17 chr13:52169800-52179600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr13:52169800-52187000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr13:52169800-52188600 Weak transcription Esophagus oesophagus
20 chr13:52169800-52188600 Weak transcription Gastric stomach
21 chr13:52171000-52176800 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr13:52171000-52180000 Weak transcription Psoas Muscle Psoas
23 chr13:52171200-52176200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr13:52171200-52176200 Weak transcription A549 lung
25 chr13:52171400-52177400 Weak transcription HMEC breast
26 chr13:52171800-52177000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr13:52171800-52179000 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr13:52173200-52176800 Enhancers Primary hematopoietic stem cells blood
29 chr13:52173200-52177200 Enhancers Primary neutrophils fromperipheralblood blood
30 chr13:52173400-52176600 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr13:52173400-52177000 Enhancers Primary B cells from cord blood blood
32 chr13:52173400-52177000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr13:52173400-52177200 Enhancers Primary B cells from peripheral blood blood
34 chr13:52173600-52190400 Weak transcription Fetal Heart heart
35 chr13:52174000-52176200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr13:52174000-52179800 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr13:52174200-52177200 Strong transcription NHEK skin
38 chr13:52174200-52183000 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr13:52174200-52188200 Weak transcription Primary T cells fromperipheralblood blood
40 chr13:52174400-52176200 Weak transcription NHDF-Ad bronchial
41 chr13:52174400-52176800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr13:52174400-52188400 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr13:52174600-52176200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr13:52174600-52179800 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr13:52174600-52179800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr13:52174600-52183000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr13:52174800-52176800 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr13:52174800-52179200 Weak transcription Brain Angular Gyrus brain
49 chr13:52174800-52181200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr13:52174800-52181400 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015