Variant report

No.	Distal block	Cell Line	Cell type
1	chr11:100906950..100909158-chr11:100997718..100999682,2	MCF-7	breast:
2	chr11:100902021..100907225-chr11:100907692..100911807,4	K562	blood:
3	chr11:100905242..100907225-chr11:100907692..100910452,2	K562	blood:
4	chr11:100865208..100867166-chr11:100905711..100908021,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs471767	0.83[YRI][hapmap]
rs477151	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs492457	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs503194	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs503362	1.00[CEU][hapmap]
rs518300	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs519792	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs529216	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs534200	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs543936	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs545004	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs545845	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs552916	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs561610	0.86[CEU][hapmap]
rs577615	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs578029	0.95[CEU][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs639838	0.82[CEU][hapmap]
rs658370	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs660149	0.95[CEU][hapmap];0.88[YRI][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs666207	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs679275	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048356	chr11:100713096-101058995	Strong transcription Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv541154	chr11:100713096-101058995	Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:100905200-100935800	Weak transcription	Colon Smooth Muscle	Colon
2	chr11:100905400-100911000	Weak transcription	Ovary	ovary
3	chr11:100905400-100920000	Weak transcription	Fetal Lung	lung
4	chr11:100905400-100997600	Weak transcription	Left Ventricle	heart
5	chr11:100905600-100908600	Weak transcription	Adipose Nuclei	Adipose
6	chr11:100905600-100910400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr11:100905800-100908400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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