Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12802554	0.83[EUR][1000 genomes]
rs477151	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs492457	0.84[EUR][1000 genomes]
rs502465	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs503194	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs518162	1.00[ASN][1000 genomes]
rs518300	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs519792	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs529216	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs534200	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs543936	0.84[EUR][1000 genomes]
rs545004	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs545845	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs552916	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs577615	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs580512	1.00[ASN][1000 genomes]
rs582691	1.00[ASN][1000 genomes]
rs601040	0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs660149	0.81[AMR][1000 genomes]
rs666207	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs679275	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048356	chr11:100713096-101058995	Strong transcription Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv541154	chr11:100713096-101058995	Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:100905400-100997600	Weak transcription	Left Ventricle	heart
2	chr11:100954400-100967200	Weak transcription	Aorta	Aorta
3	chr11:100955000-100958600	Weak transcription	Ovary	ovary
4	chr11:100955200-100958400	Weak transcription	Fetal Lung	lung
5	chr11:100957200-100960000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast

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