Variant report

Variant	rs5031036
Chromosome Location	chr11:102666164-102666165
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10488	0.89[CEU][hapmap];1.00[CHB][hapmap];0.81[YRI][hapmap];0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17860946	1.00[ASN][1000 genomes]
rs17880109	1.00[ASN][1000 genomes]
rs17881293	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17884081	0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs470130	0.93[YRI][hapmap];0.84[AFR][1000 genomes]
rs470231	0.83[AFR][1000 genomes]
rs470504	0.84[AFR][1000 genomes]
rs57842473	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61595211	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73589535	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:102651600-102667600	Weak transcription	NHDF-Ad	bronchial
2	chr11:102655600-102668600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr11:102657200-102667600	Weak transcription	Fetal Intestine Small	intestine
4	chr11:102662000-102667600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr11:102662200-102668400	Weak transcription	NHLF	lung
6	chr11:102663000-102668000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr11:102663000-102668600	Weak transcription	NHEK	skin
8	chr11:102664000-102666200	Enhancers	Stomach Mucosa	stomach
9	chr11:102664200-102668800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr11:102664400-102667600	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr11:102665200-102667400	Weak transcription	HUVEC	blood vessel
12	chr11:102665200-102669400	Weak transcription	Duodenum Mucosa	Duodenum
13	chr11:102665400-102668400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr11:102665400-102668400	Weak transcription	HMEC	breast
15	chr11:102665400-102672000	Weak transcription	Fetal Stomach	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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