Variant report

Variant	rs470130
Chromosome Location	chr11:102655263-102655264
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10488	0.85[YRI][hapmap]
rs17884081	0.81[AFR][1000 genomes]
rs470154	0.88[JPT][hapmap]
rs470221	0.94[ASN][1000 genomes]
rs470226	0.88[JPT][hapmap];0.87[ASN][1000 genomes]
rs470231	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs470277	0.89[JPT][hapmap]
rs470329	0.89[JPT][hapmap]
rs470504	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs470558	0.88[JPT][hapmap]
rs488178	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs491152	0.88[JPT][hapmap];0.81[ASN][1000 genomes]
rs5031036	0.93[YRI][hapmap];0.84[AFR][1000 genomes]
rs521898	0.87[ASN][1000 genomes]
rs547561	0.88[JPT][hapmap]
rs57842473	0.93[AFR][1000 genomes]
rs61595211	0.93[AFR][1000 genomes]
rs73589535	0.93[AFR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:102651600-102667600	Weak transcription	NHDF-Ad	bronchial
2	chr11:102652000-102656800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr11:102652000-102661200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr11:102652000-102661200	Weak transcription	NHLF	lung
5	chr11:102652600-102656800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr11:102653000-102655600	Enhancers	NHEK	skin
7	chr11:102654200-102655600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr11:102655000-102657200	Weak transcription	Stomach Mucosa	stomach
9	chr11:102655200-102660600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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