Variant report

Variant	rs470277
Chromosome Location	chr11:102649543-102649544
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11225417	0.80[AMR][1000 genomes]
rs11225421	1.00[YRI][hapmap]
rs11225423	1.00[YRI][hapmap]
rs12272274	1.00[YRI][hapmap]
rs12274582	1.00[YRI][hapmap]
rs12282811	1.00[YRI][hapmap]
rs12283006	1.00[YRI][hapmap]
rs12293223	1.00[YRI][hapmap]
rs470130	0.89[JPT][hapmap]
rs470154	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs470209	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs470226	1.00[JPT][hapmap];0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs470249	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs470329	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs470558	1.00[JPT][hapmap];0.86[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs491152	1.00[JPT][hapmap];0.86[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs521898	0.90[ASN][1000 genomes]
rs547561	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:102644800-102651000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr11:102647400-102650200	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr11:102647400-102651000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr11:102647600-102650200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr11:102647600-102651000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr11:102647600-102651200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr11:102647800-102650800	Weak transcription	NHEK	skin
8	chr11:102647800-102651000	Weak transcription	HMEC	breast
9	chr11:102647800-102651600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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