Variant report

Variant rs513406
Chromosome Location chr19:37439147-37439148
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:37408200-37440600 Weak transcription Stomach Mucosa stomach
2 chr19:37408400-37440600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr19:37408600-37439600 Weak transcription Fetal Heart heart
4 chr19:37409000-37444800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:37409000-37447400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr19:37415800-37444600 ZNF genes & repeats Liver Liver
7 chr19:37419400-37447400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr19:37420600-37443000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
9 chr19:37420600-37447400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
10 chr19:37420600-37447600 ZNF genes & repeats Adipose Nuclei Adipose
11 chr19:37427200-37441600 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
12 chr19:37430800-37443200 Weak transcription Pancreas Pancrea
13 chr19:37432600-37441400 ZNF genes & repeats Primary T cells fromperipheralblood blood
14 chr19:37433000-37442000 ZNF genes & repeats Ovary ovary
15 chr19:37433600-37439200 Strong transcription Right Ventricle heart
16 chr19:37433800-37439600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr19:37434600-37439800 ZNF genes & repeats Aorta Aorta
18 chr19:37435200-37440000 Weak transcription Right Atrium heart
19 chr19:37435200-37442600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr19:37435400-37444400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr19:37436000-37441600 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
22 chr19:37436000-37442000 Strong transcription Placenta Amnion Placenta Amnion
23 chr19:37436200-37439200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr19:37437000-37440600 Weak transcription Thymus Thymus
25 chr19:37437400-37442600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
26 chr19:37437600-37441800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
27 chr19:37437800-37439400 Strong transcription Brain Anterior Caudate brain
28 chr19:37437800-37439400 Strong transcription Fetal Muscle Trunk muscle
29 chr19:37437800-37439600 Strong transcription Brain Angular Gyrus brain
30 chr19:37437800-37440600 Strong transcription Fetal Muscle Leg muscle
31 chr19:37437800-37440600 Strong transcription Skeletal Muscle Male skeletal muscle
32 chr19:37437800-37441800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
33 chr19:37437800-37441800 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
34 chr19:37437800-37442000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
35 chr19:37437800-37442000 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
36 chr19:37437800-37442400 ZNF genes & repeats Brain Hippocampus Middle brain
37 chr19:37438000-37439400 Weak transcription Fetal Stomach stomach
38 chr19:37438000-37439800 Strong transcription Brain Inferior Temporal Lobe brain
39 chr19:37438000-37441600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr19:37438000-37442000 ZNF genes & repeats Primary B cells from cord blood blood
41 chr19:37438200-37439200 ZNF genes & repeats Brain Germinal Matrix brain
42 chr19:37438200-37439400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr19:37438200-37439600 Strong transcription Primary T killer memory cells from peripheral blood blood
44 chr19:37438200-37439600 Strong transcription Fetal Brain Female brain
45 chr19:37438200-37439800 Strong transcription Rectal Smooth Muscle rectum
46 chr19:37438200-37440000 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
47 chr19:37438200-37440600 Strong transcription Fetal Brain Male brain
48 chr19:37438200-37441600 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
49 chr19:37438200-37441600 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
50 chr19:37438200-37441600 Strong transcription Placenta Placenta

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