Variant report

Variant rs551717
Chromosome Location chr19:37427879-37427880
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:37408200-37436400 Weak transcription Fetal Thymus thymus
2 chr19:37408200-37440600 Weak transcription Stomach Mucosa stomach
3 chr19:37408400-37440600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr19:37408600-37439600 Weak transcription Fetal Heart heart
5 chr19:37409000-37444800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr19:37409000-37447400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr19:37413800-37428000 Weak transcription HUVEC blood vessel
8 chr19:37415800-37444600 ZNF genes & repeats Liver Liver
9 chr19:37419400-37447400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr19:37420600-37443000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
11 chr19:37420600-37447400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
12 chr19:37420600-37447600 ZNF genes & repeats Adipose Nuclei Adipose
13 chr19:37423000-37428200 Weak transcription Fetal Brain Male brain
14 chr19:37423600-37428000 Weak transcription Thymus Thymus
15 chr19:37423600-37430000 Weak transcription Fetal Stomach stomach
16 chr19:37426000-37432000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr19:37426800-37428000 ZNF genes & repeats Primary B cells from cord blood blood
18 chr19:37426800-37430400 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
19 chr19:37426800-37438200 Strong transcription Skeletal Muscle Female skeletal muscle
20 chr19:37427000-37432200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr19:37427200-37428200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
22 chr19:37427200-37429000 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
23 chr19:37427200-37429800 ZNF genes & repeats Primary T cells fromperipheralblood blood
24 chr19:37427200-37430400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
25 chr19:37427200-37433800 Strong transcription Dnd41 blood
26 chr19:37427200-37437200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr19:37427200-37441600 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
28 chr19:37427400-37428200 ZNF genes & repeats Primary T cells from cord blood blood
29 chr19:37427400-37428200 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
30 chr19:37427400-37428200 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
31 chr19:37427400-37428200 ZNF genes & repeats Colonic Mucosa Colon
32 chr19:37427400-37429400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
33 chr19:37427400-37430400 ZNF genes & repeats Primary hematopoietic stem cells blood
34 chr19:37427400-37430400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
35 chr19:37427400-37430600 Strong transcription Brain Substantia Nigra brain
36 chr19:37427400-37431200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr19:37427400-37431400 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr19:37427400-37432400 Strong transcription Primary T helper naive cells from peripheral blood blood
39 chr19:37427400-37432400 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
40 chr19:37427400-37432600 Strong transcription Primary B cells from peripheral blood blood
41 chr19:37427400-37432800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr19:37427400-37432800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
43 chr19:37427400-37437200 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
44 chr19:37427400-37437400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr19:37427600-37428000 Strong transcription Esophagus oesophagus
46 chr19:37427600-37428000 ZNF genes & repeats Ovary ovary
47 chr19:37427600-37428000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
48 chr19:37427600-37428000 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
49 chr19:37427600-37428000 ZNF genes & repeats NH-A brain
50 chr19:37427600-37428000 ZNF genes & repeats NHEK skin

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