Variant report

Variant rs533894945
Chromosome Location chr19:52216615-52216616
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52208400-52218200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr19:52208400-52220200 Weak transcription Ovary ovary
3 chr19:52208600-52218800 Weak transcription Fetal Heart heart
4 chr19:52208800-52222000 Weak transcription Brain Inferior Temporal Lobe brain
5 chr19:52209600-52222400 Weak transcription Spleen Spleen
6 chr19:52210400-52216800 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr19:52210400-52218200 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr19:52210400-52222000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr19:52211000-52218000 Weak transcription Brain Hippocampus Middle brain
10 chr19:52211200-52218200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr19:52211400-52219200 Weak transcription Brain Angular Gyrus brain
12 chr19:52211600-52218400 Weak transcription K562 blood
13 chr19:52213000-52217000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr19:52213200-52217000 Weak transcription Esophagus oesophagus
15 chr19:52213200-52217200 Weak transcription Placenta Placenta
16 chr19:52213400-52217000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr19:52213400-52218000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr19:52213800-52218200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr19:52214200-52222400 Weak transcription HSMM muscle
20 chr19:52214400-52216800 Enhancers Primary neutrophils fromperipheralblood blood
21 chr19:52214800-52216800 Enhancers Primary monocytes fromperipheralblood blood
22 chr19:52215600-52217400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr19:52216200-52221200 Strong transcription Osteobl bone
24 chr19:52216400-52216800 Enhancers Primary B cells from cord blood blood
25 chr19:52216600-52216800 Enhancers Right Ventricle heart
26 chr19:52216600-52217200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
27 chr19:52216600-52217400 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell

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