Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1271104	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs481203	1.00[YRI][hapmap]
rs503938	1.00[YRI][hapmap]
rs512672	1.00[EUR][1000 genomes]
rs515931	1.00[YRI][hapmap];1.00[EUR][1000 genomes]
rs551893	1.00[YRI][hapmap]
rs558324	1.00[YRI][hapmap]
rs584783	1.00[YRI][hapmap]
rs590908	1.00[YRI][hapmap]
rs592759	1.00[YRI][hapmap]
rs605666	1.00[YRI][hapmap]
rs628230	1.00[YRI][hapmap]
rs630885	1.00[YRI][hapmap]
rs632549	1.00[YRI][hapmap]
rs648155	1.00[YRI][hapmap]
rs659654	1.00[YRI][hapmap]
rs663379	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs668564	1.00[YRI][hapmap]
rs669658	1.00[YRI][hapmap]
rs688863	1.00[YRI][hapmap]
rs73540980	1.00[EUR][1000 genomes]
rs7930028	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832257	chr11:105662753-105817576	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	esv1825856	chr11:105672706-105775768	Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105768400-105769800	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr11:105768600-105769800	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr11:105768600-105769800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr11:105768800-105777000	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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