Variant report
| Variant | rs538514 |
|---|---|
| Chromosome Location | chr3:155546552-155546553 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:155524400-155547000 | Weak transcription | HSMMtube | muscle |
| 2 | chr3:155524400-155565800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 3 | chr3:155524400-155567400 | Weak transcription | Lung | lung |
| 4 | chr3:155524400-155569400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 5 | chr3:155524600-155563400 | Weak transcription | Brain Angular Gyrus | brain |
| 6 | chr3:155524600-155568000 | Weak transcription | HUVEC | blood vessel |
| 7 | chr3:155530600-155569800 | Weak transcription | Aorta | Aorta |
| 8 | chr3:155533200-155561800 | Weak transcription | Gastric | stomach |
| 9 | chr3:155533400-155565800 | Weak transcription | HepG2 | liver |
| 10 | chr3:155533400-155569400 | Weak transcription | Brain Substantia Nigra | brain |
| 11 | chr3:155534000-155547200 | Weak transcription | GM12878-XiMat | blood |
| 12 | chr3:155535000-155568000 | Weak transcription | Right Ventricle | heart |
| 13 | chr3:155535200-155546800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 14 | chr3:155535200-155551200 | Weak transcription | NHEK | skin |
| 15 | chr3:155535400-155568800 | Weak transcription | Osteobl | bone |
| 16 | chr3:155535600-155568000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 17 | chr3:155536200-155546800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 18 | chr3:155536800-155568200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 19 | chr3:155537000-155547000 | Weak transcription | Dnd41 | blood |
| 20 | chr3:155537200-155565600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 21 | chr3:155537400-155564000 | Weak transcription | Fetal Brain Female | brain |
| 22 | chr3:155538600-155558800 | Weak transcription | Pancreas | Pancrea |
| 23 | chr3:155539200-155555400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 24 | chr3:155540000-155569400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 25 | chr3:155540200-155568000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 26 | chr3:155541000-155552000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 27 | chr3:155541000-155568000 | Weak transcription | Psoas Muscle | Psoas |
| 28 | chr3:155541200-155546600 | Weak transcription | Fetal Intestine Large | intestine |
| 29 | chr3:155541200-155546800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 30 | chr3:155541200-155547000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 31 | chr3:155541200-155547000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 32 | chr3:155541200-155547200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 33 | chr3:155541200-155567400 | Weak transcription | Ovary | ovary |
| 34 | chr3:155541400-155551200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 35 | chr3:155541600-155567800 | Weak transcription | Colonic Mucosa | Colon |
| 36 | chr3:155541800-155565800 | Weak transcription | NHDF-Ad | bronchial |
| 37 | chr3:155541800-155566000 | Weak transcription | Small Intestine | intestine |
| 38 | chr3:155542000-155547000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 39 | chr3:155542200-155552200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 40 | chr3:155542600-155546800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 41 | chr3:155542800-155547000 | Weak transcription | Brain Anterior Caudate | brain |
| 42 | chr3:155542800-155547200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 43 | chr3:155542800-155547600 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 44 | chr3:155542800-155549400 | Strong transcription | Liver | Liver |
| 45 | chr3:155542800-155549600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 46 | chr3:155542800-155553200 | Weak transcription | Primary T cells from cord blood | blood |
| 47 | chr3:155542800-155560800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 48 | chr3:155542800-155569600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 49 | chr3:155543000-155547000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 50 | chr3:155543000-155547000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
