Variant report
Variant | rs549014 |
---|---|
Chromosome Location | chr1:76671097-76671098 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10518526 | 1.00[ASN][1000 genomes] |
rs11162089 | 0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11162098 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11162099 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1146657 | 1.00[ASN][1000 genomes] |
rs1146659 | 1.00[ASN][1000 genomes] |
rs11577339 | 0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11583963 | 1.00[ASN][1000 genomes] |
rs11584597 | 1.00[ASN][1000 genomes] |
rs11587725 | 1.00[ASN][1000 genomes] |
rs11590555 | 1.00[ASN][1000 genomes] |
rs12091356 | 1.00[ASN][1000 genomes] |
rs12095328 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12122853 | 1.00[ASN][1000 genomes] |
rs1251466 | 1.00[ASN][1000 genomes] |
rs1251468 | 1.00[ASN][1000 genomes] |
rs1251469 | 1.00[ASN][1000 genomes] |
rs1684948 | 1.00[ASN][1000 genomes] |
rs17609927 | 1.00[ASN][1000 genomes] |
rs17610084 | 1.00[ASN][1000 genomes] |
rs17610851 | 1.00[ASN][1000 genomes] |
rs17626151 | 1.00[ASN][1000 genomes] |
rs17660872 | 1.00[ASN][1000 genomes] |
rs17662194 | 1.00[ASN][1000 genomes] |
rs36050099 | 1.00[ASN][1000 genomes] |
rs434302 | 0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs481510 | 0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs518915 | 1.00[ASN][1000 genomes] |
rs522414 | 0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs538977 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs541675 | 0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61771334 | 1.00[ASN][1000 genomes] |
rs61771335 | 1.00[ASN][1000 genomes] |
rs61771336 | 1.00[ASN][1000 genomes] |
rs61771337 | 1.00[ASN][1000 genomes] |
rs61773761 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61773762 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61773763 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61773764 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61773765 | 0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6667200 | 0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs923246 | 0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv870621 | chr1:76620313-76997071 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:76666400-76675000 | Weak transcription | Aorta | Aorta |
2 | chr1:76666800-76673800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |