The 2.0 version of rSNPBase

Variant report

Variant rs17609927
Chromosome Location chr1:76588080-76588081
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:76557400-76605800 Weak transcription Fetal Intestine Small intestine
2 chr1:76557600-76588800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:76575400-76606000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:76576400-76591000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:76576600-76620000 Weak transcription Primary B cells from cord blood blood
6 chr1:76577000-76590800 Weak transcription Brain Substantia Nigra brain
7 chr1:76579400-76590800 Weak transcription Brain Inferior Temporal Lobe brain
8 chr1:76579800-76590800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:76581800-76596200 Weak transcription Fetal Intestine Large intestine
10 chr1:76583400-76590200 Weak transcription Brain Hippocampus Middle brain
11 chr1:76583600-76589800 Weak transcription Brain Cingulate Gyrus brain
12 chr1:76585800-76588600 Enhancers Fetal Heart heart
13 chr1:76586400-76588400 Enhancers Fetal Lung lung
14 chr1:76586400-76590000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr1:76587000-76588200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr1:76587000-76588200 Enhancers Left Ventricle heart
17 chr1:76587000-76588400 Enhancers Skeletal Muscle Female skeletal muscle
18 chr1:76587000-76588600 Enhancers Skeletal Muscle Male skeletal muscle
19 chr1:76587000-76590200 Enhancers Lung lung
20 chr1:76587200-76590800 Weak transcription Brain Anterior Caudate brain
21 chr1:76587600-76588200 Enhancers Fetal Muscle Leg muscle
22 chr1:76587600-76588400 Enhancers Right Ventricle heart
23 chr1:76587600-76589800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:76587800-76590200 Weak transcription Fetal Kidney kidney
25 chr1:76587800-76591600 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr1:76587800-76592400 Weak transcription Gastric stomach
27 chr1:76587800-76593400 Weak transcription Stomach Smooth Muscle stomach
28 chr1:76587800-76602800 Weak transcription Right Atrium heart
29 chr1:76588000-76588400 Weak transcription Aorta Aorta
30 chr1:76588000-76588400 Enhancers Psoas Muscle Psoas
31 chr1:76588000-76589200 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015