Variant report

Variant	rs55636848
Chromosome Location	chr22:20923361-20923362
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TCF12	chr22:20923042-20923831	SK-N-SH	brain:	n/a	chr22:20923734-20923741
2	EP300	chr22:20923283-20924080	ECC-1	luminal epithelium:	n/a	n/a
3	SIN3AK20	chr22:20923135-20923652	SK-N-SH	brain:	n/a	n/a
4	MAFK	chr22:20923217-20923856	IMR90	lung:	n/a	n/a
5	CTCF	chr22:20923340-20923490	HPAF	blood vessel:	n/a	n/a
6	FOSL2	chr22:20923326-20923553	A549	lung:	n/a	n/a
7	USF1	chr22:20923267-20923726	A549	lung:	n/a	n/a
8	MAX	chr22:20923119-20923768	HCT-116	colon:	n/a	chr22:20923477-20923486 chr22:20923472-20923491 chr22:20923479-20923486 chr22:20923445-20923461 chr22:20923476-20923487
9	FOXA1	chr22:20923354-20923534	T-47D	breast:	n/a	n/a
10	MAX	chr22:20923261-20923916	Hela-S3	cervix:	n/a	chr22:20923477-20923486 chr22:20923472-20923491 chr22:20923479-20923486 chr22:20923445-20923461 chr22:20923476-20923487
11	POLR2A	chr22:20921541-20924441	K562	blood:	n/a	n/a
12	SP1	chr22:20923219-20923535	A549	lung:	n/a	chr22:20923412-20923422 chr22:20923412-20923422 chr22:20923284-20923297
13	USF1	chr22:20923258-20923685	SK-N-SH_RA	brain:	n/a	n/a
14	TEAD4	chr22:20923304-20923684	A549	lung:	n/a	chr22:20923452-20923461
15	MAX	chr22:20923193-20923859	MCF-7	breast:	n/a	chr22:20923477-20923486 chr22:20923472-20923491 chr22:20923479-20923486 chr22:20923445-20923461 chr22:20923476-20923487
16	USF1	chr22:20923247-20923645	A549	lung:	n/a	n/a
17	SIN3AK20	chr22:20923332-20923560	A549	lung:	n/a	n/a
18	POLR2A	chr22:20923155-20924049	HL-60	blood:	n/a	n/a
19	POLR2A	chr22:20923348-20923519	GM12878	blood:	n/a	n/a
20	FOS	chr22:20923254-20923899	MCF10A-Er-Src	breast:	n/a	n/a
21	POLR2A	chr22:20923156-20924054	HL-60	blood:	n/a	n/a
22	MAX	chr22:20923079-20924032	A549	lung:	n/a	chr22:20923477-20923486 chr22:20923472-20923491 chr22:20923479-20923486 chr22:20923445-20923461 chr22:20923476-20923487
23	POLR2A	chr22:20920745-20923831	K562	blood:	n/a	n/a
24	FOS	chr22:20923262-20923879	MCF10A-Er-Src	breast:	n/a	n/a
25	TCF12	chr22:20922994-20924282	ECC-1	luminal epithelium:	n/a	chr22:20923734-20923741
26	MAX	chr22:20923095-20924074	HCT-116	colon:	n/a	chr22:20923477-20923486 chr22:20923472-20923491 chr22:20923479-20923486 chr22:20923445-20923461 chr22:20923476-20923487
27	TEAD4	chr22:20923187-20923766	HCT-116	colon:	n/a	chr22:20923452-20923461
28	USF1	chr22:20923298-20923707	A549	lung:	n/a	n/a
29	FOSL2	chr22:20923237-20923706	A549	lung:	n/a	n/a
30	USF2	chr22:20923321-20923465	GM12878	blood:	n/a	chr22:20923441-20923452
31	ZNF143	chr22:20923330-20923400	Hela-S3	cervix:	n/a	n/a
32	USF1	chr22:20923152-20924080	ECC-1	luminal epithelium:	n/a	n/a
33	NR3C1	chr22:20923185-20923968	ECC-1	luminal epithelium:	n/a	n/a
34	MAX	chr22:20923077-20924150	ECC-1	luminal epithelium:	n/a	chr22:20923477-20923486 chr22:20923472-20923491 chr22:20923479-20923486 chr22:20923445-20923461 chr22:20923476-20923487
35	USF1	chr22:20923295-20923643	A549	lung:	n/a	n/a
36	USF1	chr22:20923153-20924021	HCT-116	colon:	n/a	n/a
37	TEAD4	chr22:20923158-20924199	ECC-1	luminal epithelium:	n/a	chr22:20923452-20923461
38	POLR2A	chr22:20923344-20923510	ProgFib	skin:	n/a	n/a
39	CTCF	chr22:20923280-20923570	AG04449	skin:	n/a	n/a
40	MAX	chr22:20923079-20923732	A549	lung:	n/a	chr22:20923477-20923486 chr22:20923472-20923491 chr22:20923479-20923486 chr22:20923445-20923461 chr22:20923476-20923487
41	RFX5	chr22:20923303-20923861	Hela-S3	cervix:	n/a	n/a
42	FOS	chr22:20923248-20923956	MCF10A-Er-Src	breast:	n/a	n/a
43	POLR2A	chr22:20923321-20924321	K562	blood:	n/a	n/a
44	POLR2A	chr22:20923214-20923936	GM12878	blood:	n/a	n/a
45	MAX	chr22:20923250-20923677	A549	lung:	n/a	chr22:20923477-20923486 chr22:20923472-20923491 chr22:20923479-20923486 chr22:20923445-20923461 chr22:20923476-20923487
46	MYC	chr22:20923190-20924009	MCF10A-Er-Src	breast:	n/a	chr22:20923477-20923486 chr22:20923472-20923491 chr22:20923479-20923486 chr22:20923445-20923461 chr22:20923476-20923487
47	USF1	chr22:20923167-20923734	SK-N-SH	brain:	n/a	n/a
48	CEBPB	chr22:20923262-20923904	IMR90	lung:	n/a	n/a
49	SP1	chr22:20923176-20923705	A549	lung:	n/a	chr22:20923412-20923422 chr22:20923412-20923422 chr22:20923284-20923297
50	POLR2A	chr22:20923260-20923598	U87	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr22:20861594..20864196-chr22:20922642..20925660,5	K562	blood:
2	chr22:20921278..20923671-chr22:20932565..20934533,2	K562	blood:
3	chr22:20922724..20925234-chr22:20937090..20939809,2	MCF-7	breast:
4	chr22:20812863..20815279-chr22:20922171..20925852,3	K562	blood:
5	chr22:20782195..20784549-chr22:20923300..20925605,2	MCF-7	breast:
6	chr22:20889052..20891139-chr22:20921450..20923889,2	MCF-7	breast:
7	chr22:20922014..20923796-chr22:21008277..21010407,2	K562	blood:

Variant related genes	Relation type
MED15	TF binding region
ENSG00000099917	Chromatin interaction
ENSG00000244486	Chromatin interaction

Extended variants
information (count: 81 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs12160935	1.00[AMR][1000 genomes]
rs56023828	1.00[AMR][1000 genomes]
rs57039063	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs5759496	0.85[AMR][1000 genomes]
rs5995304	1.00[AMR][1000 genomes]
rs5995739	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs5995779	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs5996131	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6001257	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6001392	1.00[AMR][1000 genomes]
rs6001632	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6001902	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6001917	0.85[AMR][1000 genomes]
rs6002508	0.85[AMR][1000 genomes]
rs6003243	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7290040	1.00[AMR][1000 genomes]
rs73877705	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73877706	1.00[AMR][1000 genomes]
rs73877708	1.00[AMR][1000 genomes]
rs73877709	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73879393	1.00[AMR][1000 genomes]
rs73879395	1.00[AMR][1000 genomes]
rs73879402	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8137236	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8137729	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:56 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518950	chr22:20306993-20965555	Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
2	nsv432174	chr22:20309346-21102446	Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	77 gene(s)	inside rSNPs	diseases
3	nsv1056614	chr22:20470598-21462724	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
4	nsv491637	chr22:20659547-21440514	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
5	nsv916634	chr22:20659547-21464119	Strong transcription Flanking Active TSS Genic enhancers Weak transcription Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
6	nsv533942	chr22:20659547-21505417	Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
7	nsv529472	chr22:20659547-21561514	Flanking Active TSS Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
8	nsv914390	chr22:20697466-21460008	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
9	nsv588291	chr22:20698139-21461274	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
10	nsv917647	chr22:20708889-21440515	Genic enhancers Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
11	nsv531742	chr22:20708890-21407690	Strong transcription Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
12	nsv533852	chr22:20708890-21561514	Weak transcription Genic enhancers Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
13	nsv1061867	chr22:20716924-21462446	Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
14	nsv1058870	chr22:20716924-21567219	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
15	nsv918225	chr22:20716924-21611338	Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
16	nsv914393	chr22:20718116-21034788	Genic enhancers Strong transcription Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
17	nsv531744	chr22:20718170-21427936	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
18	nsv915954	chr22:20732437-21505417	Weak transcription Enhancers Genic enhancers Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
19	nsv588293	chr22:20732809-21004476	Bivalent/Poised TSS Strong transcription Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
20	nsv948669	chr22:20732809-21461607	Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
21	nsv531746	chr22:20733427-21505417	Strong transcription Flanking Active TSS Weak transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
22	nsv588294	chr22:20733495-21365384	Bivalent Enhancer Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
23	nsv588295	chr22:20733495-21462353	Flanking Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
24	nsv588296	chr22:20733495-21465780	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
25	nsv1056065	chr22:20734244-21460658	Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
26	nsv544586	chr22:20734244-21460658	Strong transcription Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
27	nsv1067074	chr22:20739124-21440654	Flanking Active TSS Weak transcription Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
28	nsv544587	chr22:20739124-21440654	Weak transcription Strong transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
29	nsv1066482	chr22:20739125-21440655	Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
30	nsv544588	chr22:20739125-21440655	Strong transcription Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
31	nsv1065725	chr22:20739324-20927615	Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
32	nsv544589	chr22:20739324-20927615	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
33	nsv1063333	chr22:20739324-21353297	Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
34	nsv544590	chr22:20739324-21353297	Genic enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
35	nsv1059978	chr22:20739324-21440515	Genic enhancers Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
36	nsv544591	chr22:20739324-21440515	Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
37	nsv949306	chr22:20742450-21461607	Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
38	nsv523162	chr22:20743536-21462353	Enhancers Strong transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
39	nsv1056565	chr22:20745762-21460658	Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
40	nsv529335	chr22:20748976-21499971	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
41	nsv533337	chr22:20754407-21440515	Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
42	nsv918090	chr22:20754421-21505417	Flanking Active TSS Enhancers Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
43	nsv491620	chr22:20754422-21440514	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
44	nsv1067639	chr22:20754422-21505417	Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
45	nsv529720	chr22:20754422-21505417	Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
46	nsv834138	chr22:20759359-20951242	Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
47	nsv1058923	chr22:20855359-21000991	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
48	nsv1065938	chr22:20863293-20992701	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
49	nsv544593	chr22:20863293-20992701	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
50	nsv995094	chr22:20895155-21374512	Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:20911800-20931000	Strong transcription	Primary neutrophils fromperipheralblood	blood
2	chr22:20913800-20942000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr22:20914000-20923400	Strong transcription	Fetal Intestine Small	intestine
4	chr22:20914000-20946000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr22:20914400-20934600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr22:20914400-20941800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr22:20914400-20942000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr22:20917200-20923800	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr22:20917400-20923800	Strong transcription	Primary B cells from cord blood	blood
10	chr22:20917600-20942400	Strong transcription	Fetal Brain Female	brain
11	chr22:20918400-20929600	Genic enhancers	Placenta	Placenta
12	chr22:20918600-20924200	Strong transcription	Primary hematopoietic stem cells	blood
13	chr22:20918600-20926000	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr22:20918600-20928400	Genic enhancers	NHLF	lung
15	chr22:20918600-20929600	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr22:20918600-20942800	Strong transcription	Brain Germinal Matrix	brain
17	chr22:20918800-20924200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
18	chr22:20918800-20924400	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr22:20918800-20924400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr22:20918800-20924400	Strong transcription	HepG2	liver
21	chr22:20918800-20924400	Strong transcription	HUVEC	blood vessel
22	chr22:20918800-20924600	Strong transcription	iPS-15b Cell Line	embryonic stem cell
23	chr22:20918800-20925800	Genic enhancers	Fetal Thymus	thymus
24	chr22:20918800-20930600	Strong transcription	K562	blood
25	chr22:20918800-20942600	Strong transcription	HUES6 Cell Line	embryonic stem cell
26	chr22:20918800-20942800	Strong transcription	Cortex derived primary cultured neurospheres	brain
27	chr22:20919000-20924400	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr22:20919000-20925800	Genic enhancers	HMEC	breast
29	chr22:20919000-20933600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
30	chr22:20919000-20934400	Strong transcription	HUES64 Cell Line	embryonic stem cell
31	chr22:20919200-20923800	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr22:20919400-20923600	Genic enhancers	NHDF-Ad	bronchial
33	chr22:20919400-20924600	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr22:20919400-20933400	Strong transcription	HUES48 Cell Line	embryonic stem cell
35	chr22:20919600-20923800	Strong transcription	ES-I3 Cell Line	embryonic stem cell
36	chr22:20919600-20924200	Strong transcription	H1 Cell Line	embryonic stem cell
37	chr22:20919600-20924400	Strong transcription	H9 Cell Line	embryonic stem cell
38	chr22:20919800-20924200	Strong transcription	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr22:20920000-20924200	Genic enhancers	Adipose Nuclei	Adipose
40	chr22:20920000-20924200	Genic enhancers	Thymus	Thymus
41	chr22:20920000-20924400	Genic enhancers	Esophagus	oesophagus
42	chr22:20920000-20924400	Genic enhancers	HSMMtube	muscle
43	chr22:20920200-20923800	Genic enhancers	HSMM	muscle
44	chr22:20920600-20923600	Genic enhancers	Muscle Satellite Cultured Cells	--
45	chr22:20920600-20924000	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr22:20920600-20924200	Genic enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr22:20920600-20924200	Genic enhancers	Colon Smooth Muscle	Colon
48	chr22:20920600-20924400	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
49	chr22:20920600-20924400	Genic enhancers	Pancreas	Pancrea
50	chr22:20920600-20926200	Genic enhancers	Osteobl	bone

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