Variant report

Variant rs6002508
Chromosome Location chr22:20912254-20912255
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20864400-20913000 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr22:20886000-20915400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr22:20890800-20923000 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr22:20900600-20912800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr22:20903200-20913200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
6 chr22:20903400-20915200 Strong transcription NHEK skin
7 chr22:20904200-20917200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr22:20905000-20923000 Strong transcription Primary monocytes fromperipheralblood blood
9 chr22:20905400-20913400 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
10 chr22:20905400-20913600 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr22:20905400-20914600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr22:20905600-20913000 Genic enhancers Fetal Muscle Leg muscle
13 chr22:20905800-20912400 Strong transcription Brain Germinal Matrix brain
14 chr22:20905800-20913000 Strong transcription Primary B cells from cord blood blood
15 chr22:20905800-20913000 Genic enhancers Placenta Placenta
16 chr22:20905800-20917800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr22:20906000-20912400 Genic enhancers Fetal Muscle Trunk muscle
18 chr22:20906000-20913000 Strong transcription iPS-18 Cell Line embryonic stem cell
19 chr22:20906000-20913000 Strong transcription Fetal Brain Female brain
20 chr22:20906200-20913200 Strong transcription HUES64 Cell Line embryonic stem cell
21 chr22:20906400-20914400 Strong transcription HUES48 Cell Line embryonic stem cell
22 chr22:20906400-20914400 Strong transcription HUES6 Cell Line embryonic stem cell
23 chr22:20906600-20912400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr22:20907200-20912600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr22:20907400-20918000 Strong transcription Liver Liver
26 chr22:20907400-20921200 Weak transcription Small Intestine intestine
27 chr22:20908000-20913000 Enhancers Psoas Muscle Psoas
28 chr22:20908000-20913400 Genic enhancers Spleen Spleen
29 chr22:20908000-20914000 Strong transcription Rectal Smooth Muscle rectum
30 chr22:20908400-20912800 Strong transcription Fetal Intestine Small intestine
31 chr22:20908400-20912800 Strong transcription Fetal Lung lung
32 chr22:20908400-20922800 Strong transcription Fetal Intestine Large intestine
33 chr22:20908600-20912600 Strong transcription Fetal Stomach stomach
34 chr22:20908800-20913800 Strong transcription Fetal Kidney kidney
35 chr22:20909000-20912600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr22:20909000-20913200 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
37 chr22:20909000-20914600 Strong transcription HepG2 liver
38 chr22:20909000-20921000 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr22:20909200-20915600 Strong transcription Sigmoid Colon Sigmoid Colon
40 chr22:20909400-20914400 Strong transcription Brain Substantia Nigra brain
41 chr22:20909800-20913000 Weak transcription H1 Cell Line embryonic stem cell
42 chr22:20909800-20914400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr22:20910000-20912400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr22:20910000-20912600 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr22:20910000-20913400 Strong transcription Colonic Mucosa Colon
46 chr22:20910000-20916600 Strong transcription HMEC breast
47 chr22:20910200-20912600 Enhancers Left Ventricle heart
48 chr22:20910200-20913200 Enhancers Skeletal Muscle Male skeletal muscle
49 chr22:20910200-20915200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr22:20910400-20912800 Strong transcription Breast Myoepithelial Primary Cells Breast

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