Variant report

Variant rs56023828
Chromosome Location chr22:20943590-20943591
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20914000-20946000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr22:20936600-20944400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr22:20940000-20945800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr22:20940200-20943800 Weak transcription A549 lung
5 chr22:20940200-20945400 Weak transcription HSMM muscle
6 chr22:20940200-20946000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr22:20940600-20944200 Weak transcription Stomach Mucosa stomach
8 chr22:20940600-20945600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr22:20941000-20946200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr22:20941200-20944600 Weak transcription NHDF-Ad bronchial
11 chr22:20941400-20943600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr22:20941400-20945600 Weak transcription HepG2 liver
13 chr22:20941400-20951400 Weak transcription H9 Cell Line embryonic stem cell
14 chr22:20941600-20945800 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr22:20941600-20946200 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr22:20941600-20946200 Weak transcription Colon Smooth Muscle Colon
17 chr22:20941800-20943600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr22:20941800-20943600 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr22:20941800-20944400 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr22:20941800-20945000 Weak transcription K562 blood
21 chr22:20941800-20945000 Weak transcription NH-A brain
22 chr22:20941800-20945800 Weak transcription H1 Cell Line embryonic stem cell
23 chr22:20941800-20945800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr22:20941800-20946000 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr22:20941800-20946000 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr22:20942000-20943600 Enhancers NHEK skin
27 chr22:20942000-20943800 Weak transcription Primary B cells from peripheral blood blood
28 chr22:20942000-20943800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr22:20942000-20943800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr22:20942000-20944800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr22:20942000-20946000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr22:20942200-20943800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr22:20942200-20943800 Weak transcription Primary B cells from cord blood blood
34 chr22:20942200-20943800 Weak transcription Rectal Smooth Muscle rectum
35 chr22:20942200-20944000 Weak transcription Liver Liver
36 chr22:20942200-20944000 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr22:20942200-20945600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr22:20942200-20946000 Weak transcription Ovary ovary
39 chr22:20942200-20947200 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr22:20942400-20943600 Weak transcription Placenta Placenta
41 chr22:20942400-20944000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr22:20942400-20944000 Weak transcription Aorta Aorta
43 chr22:20942400-20944000 Weak transcription Brain Cingulate Gyrus brain
44 chr22:20942400-20944200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr22:20942400-20944200 Weak transcription Adipose Nuclei Adipose
46 chr22:20942400-20944200 Weak transcription Brain Anterior Caudate brain
47 chr22:20942400-20944200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr22:20942400-20944200 Weak transcription Brain Substantia Nigra brain
49 chr22:20942400-20944200 Weak transcription Dnd41 blood
50 chr22:20942400-20944200 Enhancers HMEC breast

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